| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2162 |
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| Symbol | |
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| ID | 4908771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1999558 |
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| End bp | 2000154 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640125916 |
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| Product | V-type ATPase, D subunit |
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| Protein accession | YP_001057043 |
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| Protein GI | 126460765 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1394] Archaeal/vacuolar-type H+-ATPase subunit D |
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| TIGRFAM ID | [TIGR00309] H(+)-transporting ATP synthase, vacuolar type, subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTCTTTTA GGCCTCCTCC GTCAAGGCTG GAACTAATAC GCCTAAGAAG ACAGCTGGCC
CTATTCCGCC GCATTAGAAA AACTTTGGAA GACGCCAGAA ATTCCACTAT ACAGAGAATT
AGGGCCCTAA TAGCGGACTT GGAGAAACTT AGGCGTGAAA TCGCAGATGG CTTCACAGAA
GTCGCCGACA ATTTTAGAAT CGCCGTGGCA AAGTCCGGCA TCGACAGAAT AAATCTGCTG
GCAGAGCTGA CTCCAAAAAC TGTAGAAACG AAAATTGTAG ACAAGGGGAC TCACCTAGGC
CTTGAAATTA GAAATTTTGC AAGCTATCCC GTATACAGCA TAATCTCTGA GGCGGCAGAG
TTGGACATAG CCTTGTCCAA GATGAAGCTA TTAACACAGA GATTAGTGGA ATTCGCAGAA
AAAGAGACAC TATTTTATGT GCTTCTAAAT AGAGTAAAGG AGTATCAGAG AATGATTAAC
GCTATAGACT ACGTTATAAT TCCACGCATA GAAGAGAATA TACGGTATAT CAGATTAGCT
CTAGACGAGA GAGAAAGAGA AGAATTTATC CGCCGGAAAA TAACCACCCA AATTTAA
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| Protein sequence | MSFRPPPSRL ELIRLRRQLA LFRRIRKTLE DARNSTIQRI RALIADLEKL RREIADGFTE
VADNFRIAVA KSGIDRINLL AELTPKTVET KIVDKGTHLG LEIRNFASYP VYSIISEAAE
LDIALSKMKL LTQRLVEFAE KETLFYVLLN RVKEYQRMIN AIDYVIIPRI EENIRYIRLA
LDEREREEFI RRKITTQI
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