Gene Pcal_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2125 
Symbol 
ID4908414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1970359 
End bp1970790 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content49% 
IMG OID640125879 
ProductNUDIX hydrolase 
Protein accessionYP_001057006 
Protein GI126460728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGATACT TTGAGCGCTC CGCAGGCGCC GTGGTATACG CCGTAGAAGC CGACAGAGTA 
CTCTACCTAC TCTTACACGG AAAATTCGGC TGGGACTTCC CCCACGGCCT CGTACGCCTC
TACGAAACCG ACGAAGTAGC CGCCCTCAGA GAAATCCTAG AAGAAACAGG GCTCATAGTC
TCCCTCGTCC CACACTTCAG AGAAGAGATC GTATACAGAT ACTCAAGAAA GGGACGCACA
ATATACAAAG AGATAATATA CTTCTTGGCC AAAGCCAGCT CCCTAGACGT CACACTCTCA
AAAGAACACG ATGCCTACCT ATGGGCCACC AAGGAAGAGG CACTCAAGCT AGTGGCCAGA
GACGAGACAA GACAAGTACT ATTAAAAGCG GCTAAAAAAA TCTTGGAGAT TGAAAAATTG
GCTAGCCAAT AA
 
Protein sequence
MRYFERSAGA VVYAVEADRV LYLLLHGKFG WDFPHGLVRL YETDEVAALR EILEETGLIV 
SLVPHFREEI VYRYSRKGRT IYKEIIYFLA KASSLDVTLS KEHDAYLWAT KEEALKLVAR
DETRQVLLKA AKKILEIEKL ASQ