Gene Pcal_2096 details

Gene Information

• Locus tag: Pcal_2096
• Symbol: rps12P
• ID: 4910103
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1944993
• End bp: 1945436
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640125849
• Product: 30S ribosomal protein S12P
• Protein accession: YP_001056977
• Protein GI: 126460699
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0048] Ribosomal protein S12
• TIGRFAM ID: [TIGR00982] ribosomal protein S23 (S12)

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 36
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGCCTGGGA AAAAGTCGCC GTACGGCCTC TTCGCAGGCG GCAAGCTTAA GAAAAAGCGG 
CAGAAGTTTA GGTGGAACGA CGTGACTTAC AAGCGCAGGA TGTTGGGCCT TGCAGAGAAG 
TATGACCCAC TTGAGGGCGC CCCCATGGCT AGAGGAATAG TGCTCGAGAA AGTTGGAGTT 
GAGGCGAGGA AGCCTAATGC CGCCGTCAGA AAATGCGTCA GAGTACAGTT GGTAAAAAAT 
GGGAAAGTAG TGACAGCCTT TGTGCCATAC GACGGTGGCT TAAACTACAT AAATGAGCAC 
GACGAAGTTA TAATAGAACG CATAGGAGGC CCCGAGGGCA AGTCTCTTGG AGACATCCCG 
GGGGTCAGGT TTAAAGTCGT CAAAGTAAAC GGCGTATCTC TCTGGGCCAT TTGGCGTGGT 
AAAAAGCAGA AGCCGACAAG GTAA 

 

Protein sequence

MPGKKSPYGL FAGGKLKKKR QKFRWNDVTY KRRMLGLAEK YDPLEGAPMA RGIVLEKVGV 
EARKPNAAVR KCVRVQLVKN GKVVTAFVPY DGGLNYINEH DEVIIERIGG PEGKSLGDIP 
GVRFKVVKVN GVSLWAIWRG KKQKPTR