Gene Pcal_2049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2049 
Symbol 
ID4909864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1901350 
End bp1901748 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content57% 
IMG OID640125802 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001056930 
Protein GI126460652 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0933914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTC ACATAAAGCT CTTCGCAGTA GCTCTAAAAA ACCTATTTGA AAAGCCGTGG 
ACCGTTAGAT GGCCCGAGGA GAGGAGAGAC TACGGCCCGG CCCCCCGGGG ATTTATAGTA
AACGACAAGT CTAAGTGCAT CTCTTGCCAG CTGTGCGAGG CGGTCTGCCC CGCCAAGGCC
ATAAAATTCC ACCTAGAGGA AGACGGCAAG AGGTACCCCG GGATAGACTG GGGGAGGTGC
ATACTCTGCG GCTACTGCGT AGACGCTTGT CCCACCGGCT CCCTTCAGCA CACGGCCCAC
ATAGAAATCA CGTGGGACAG CCTCGACACG TATAAGAAGC CCAAGGAGAT GACGCCCGGC
TCCGTGGCCG CCGATGTCGG GGACAAGTCG CTGGTATGA
 
Protein sequence
MITHIKLFAV ALKNLFEKPW TVRWPEERRD YGPAPRGFIV NDKSKCISCQ LCEAVCPAKA 
IKFHLEEDGK RYPGIDWGRC ILCGYCVDAC PTGSLQHTAH IEITWDSLDT YKKPKEMTPG
SVAADVGDKS LV