| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_2040 |
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| Symbol | |
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| ID | 4909490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1893980 |
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| End bp | 1895326 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640125793 |
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| Product | hypothetical protein |
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| Protein accession | YP_001056921 |
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| Protein GI | 126460643 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00130094 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGGTGC GGATCCGCGG GATTTTCGCC ACGGCGTTGA CGAAGTTGGC GTTGGACTGG
GGTTTTTCCA TTGTCCAGCC TACGGGGAAG ATTGTGGAGA GGTTTGACCT GCCTGTGGAC
AACTCGCCGC CTGACGTCAC TGTGATTGAC CACGAGTCGA AAAGTGGGGT TGTCGTGCTG
GGGAAGTGCG GCGCCGTGGA GGCCTTTGTG GAAAGGCTTA GAGAGGCGGT GGATCCCGTA
GTAGTTAAGG CGGATCTGGG CGTACACGAC GTGTTTGTGG GCAAAGTTGT GGGCGAGGGG
CGCGTGGAAG GGCCGGGGGG CATTGTGCTG AGGGTACCAC CTCGGTTTGC GCCGACGGTG
GGGTCCGTGG GAGTTTTCAC CGTGGTGAGG CCGCCTCTCG GCCCAGTGGA GGGCGTGGCC
GTCCCCGACA TCATAGTCGA AGGCGACTAC GTGGAGCTCA GCACTTCGCC AGGGGTTAGG
TTTAGCCGCC ACATTCCGGA GGGGGAGCGG GTGAGGCTTA GGCTCCTCGC CGAGACCAGG
CTGGGCTGGC TGGGGGGCCT GGGGGTGAGG TTTAAATCGT CGGCGCGGTT CGCGGAGGAT
GAGGCCGTTG TTAGAGAGGC GGAGGCCCTC TACAGAGAGC TGGTGGAGCT GGCTAAGGGG
GGAGAGGCGG GTGCTGTGCT TAGGCGTGGG CGGTGTCTGG CGCTGGCGCT GTTCGACAAA
GCGGCGAAGG AGAGGCTGGA CGAGGTTAGG AGGTCGGTGG TCCCCACGGC GCGTGGCCAC
CACGCGCTTA GGGCACAGGG GCTCGGCAAA TGCCTCGACC TACTCGACTA TTTGGGCGTG
GAGGCCTATG AGCGGGCGGC CGAGTTTTTG GCTAGGGGGG CTGTGGAGAT TTGGCACATA
AAGCCCTGGG GAGAGATGGT GAAGATGCGG GGAGAGGCGG TGGGCGTCTT CGGCGACTGG
CTAGTGGTCA AGAGGCCTCT CAGGCCGGGC GGCGTCTTAG ACGGGATTGG GGTTAAGATT
GAGAGGGGGT TCTACGCCCT TACCTGTGTG CCTAGGCGGG GGAACTACGT GGTCCACACC
TACTACACGC CTGAGGGGAG GGCCGTGGGG ACGTACATAA ACGTCAACTC AGAGCCCGAG
TGGGGCAGGC GGATTATATA CATCGACCTC CTCGTAGACG TGGCGTACGT CGGCGGCGAG
GCCAAGGTGC TGGACCTGGA GGAGTACAGG AGGTACGAGG ACGTCTTCCC GGCGAGGCTT
AGGCCTCCCA GCGGGGTCCT GTCCCCGCCA GTGGCCTGCG GAGAAAGGGG GATTATTGAA
GCTCCTCCTC AGTCCGCCTC CTCTTAA
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| Protein sequence | MKVRIRGIFA TALTKLALDW GFSIVQPTGK IVERFDLPVD NSPPDVTVID HESKSGVVVL
GKCGAVEAFV ERLREAVDPV VVKADLGVHD VFVGKVVGEG RVEGPGGIVL RVPPRFAPTV
GSVGVFTVVR PPLGPVEGVA VPDIIVEGDY VELSTSPGVR FSRHIPEGER VRLRLLAETR
LGWLGGLGVR FKSSARFAED EAVVREAEAL YRELVELAKG GEAGAVLRRG RCLALALFDK
AAKERLDEVR RSVVPTARGH HALRAQGLGK CLDLLDYLGV EAYERAAEFL ARGAVEIWHI
KPWGEMVKMR GEAVGVFGDW LVVKRPLRPG GVLDGIGVKI ERGFYALTCV PRRGNYVVHT
YYTPEGRAVG TYINVNSEPE WGRRIIYIDL LVDVAYVGGE AKVLDLEEYR RYEDVFPARL
RPPSGVLSPP VACGERGIIE APPQSASS
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