Gene Pcal_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_2010 
Symbol 
ID4908981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp1866111 
End bp1867157 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content59% 
IMG OID640125762 
Productsmall GTP-binding protein 
Protein accessionYP_001056891 
Protein GI126460613 
COG category[R] General function prediction only 
COG ID[COG1084] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0504826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTTCG AGGTCGTGGA TAAGGCCAAG TTGCCCTACA TATACACCGC CGACGAGCTC 
ATCTCTATGT TTCTCACCGC CTATGCCCGA GAGGAGGCTA GGGGCTCCAC GGCTGAGCCC 
GCCTTTGTGA AACAGAAGAG GCTGGAGATT AGGCGGATAG TGACCTCGGG CAAGCTTCTC 
GCCTCGACTC TTAGGGACAT GGCGCTTAGA ATGCCCTTTC TCGACAAGTT GCACCCCTTC 
TACAGAGAGC TCATAGACGT GGTATACGGC GCGCAGGTGT ATAAACACGC GGTGGCTAAG 
GTGGGCAACG CCCACATCGC CATAAAAGCC ATAGCCAAGG AGGCTATCAC GGCCGTGAGG 
ACGGCGGCGG ACAAGAGCCA GCTCTACAAG GCGAGGAAGA TGTACCAAGC CAGAGTTATA 
GACCTACTGA GGGACTTGGC GCCGGAGCTC GACAAGCTCA GAGAAGTCGT GATCTACCTT 
AGAAAGCTAC CGTCGGTGGA CCCCACGCTC TTCACAATCG CCGTCGCGGG GGCGCCCAAC 
GTGGGGAAGA GTAGCTTCGT GAGGTGCGTG TCCACCGCGG AGCCCGAGGT GGCTGAGTAC 
CCCTTCACAA CTAAGCAGAT CCACCTGGGC CACATCATCC TAAAGGGGGA CAAGGTCCAG 
ATTGTCGACA CGCCGGGCCT CTTAGACAGG CCGCTGGCCG AGCGCAACGC CATTGAGCGG 
CAGGCCGTGC TCGCCCTGCG CCACTTGGCC AACGTGATCC TCTTCCTCGT GGACCCCACC 
CCCCACAGCG GCTACAGCTT AGAAATGCAG AAGAGGCTCT ACGACGAGAT TAAGACGAGC 
TTTGAGGCCC CCACAGTCGC TGTGGTAAAC AAGGTGGACA TAGCCACGCA GGAGGAGCTA 
GAGAAGGCCA GGGAGTTGTT CAACCCAGTG GCCCACATCT CTACGCTAAA CTGCCACGGA 
ACAAGGGAGG TGGTGGACTA CGTGTTGAAC AAGTACTACG TCCCGCTGGC CTTGGAGAAG 
CTGCGGGAGA TTCGGAGGAG GGCCTAG
 
Protein sequence
MSFEVVDKAK LPYIYTADEL ISMFLTAYAR EEARGSTAEP AFVKQKRLEI RRIVTSGKLL 
ASTLRDMALR MPFLDKLHPF YRELIDVVYG AQVYKHAVAK VGNAHIAIKA IAKEAITAVR 
TAADKSQLYK ARKMYQARVI DLLRDLAPEL DKLREVVIYL RKLPSVDPTL FTIAVAGAPN 
VGKSSFVRCV STAEPEVAEY PFTTKQIHLG HIILKGDKVQ IVDTPGLLDR PLAERNAIER 
QAVLALRHLA NVILFLVDPT PHSGYSLEMQ KRLYDEIKTS FEAPTVAVVN KVDIATQEEL 
EKARELFNPV AHISTLNCHG TREVVDYVLN KYYVPLALEK LREIRRRA