Gene Pcal_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1981 
Symbol 
ID4909440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1840282 
End bp1841034 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content63% 
IMG OID640125733 
Product5'-nucleotidase / 3'-nucleotidase / exopolyphosphatase 
Protein accessionYP_001056862 
Protein GI126460584 
COG category[R] General function prediction only 
COG ID[COG0496] Predicted acid phosphatase 
TIGRFAM ID[TIGR00087] 5'/3'-nucleotidase SurE 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGTTG TAGTTACAAA TGACGATGGG CCACAGACGC CTCTGCTTAA GCCGCTGGTA 
GAGGAGTTGA AGAAGGCCGG CCACAGAGTC GTAGTGGTGG TTCCAGAGAG ACCTCGGTCT
GCCGCAGGGC TGGCTAGGAC GTTCCACAAG CCGCTGAGAG TTAGGCAGGT GGACGGAGGC
GTCTACGTGG TGAACGGGTA TCCGGCCGAC GCCGTGTTTT TGGCCCTAAA GCTCATAGCC
CCCGACGCCG AGGTGGTGGT CTCCGGGGTC AACGTGGGGG AAAACGTGGG CGTCGAGGCG
ACCTTCGGCA GCGGCACAGT TGGCGCCGCC ATACAAGCAG GCGTCTTGGG GGTGCCCGGC
GTAGCCGTGT CCATGGAGCA GGGCGGAGAT GTTCAGCTAA TGCGGCGCGT GGCCGCGGCC
GCTGTAGACG CCGTGGGAGG CGGCTTGGGC GACGCCTACG CCGTCAGTAT AAATATCCCC
GCCGAGTGGG GCGGAGGGCT CTTCTGCCCC GAGAGGTTGG CGAGGGTGGT GTACCAGGAG
CGGCTCTACG AGGGGGTTGA CCCCCGGGGC GAGGCCTTCT ACTGGCGATG GGGCCCTAGG
CGGGAGAGAC TCGACGCTGG GACAGACGCC TACTACTTCT ACACGGAGAG GGGGATAACG
GTGATCGGCC TTTGGGAAAA CGGAGTGGCG CCGGTTGCAG AGTATGCCAA GAGGCTGGGC
TCCCTCCTTG GCGTAAAGTA CATAAAGTGT TAA
 
Protein sequence
MKVVVTNDDG PQTPLLKPLV EELKKAGHRV VVVVPERPRS AAGLARTFHK PLRVRQVDGG 
VYVVNGYPAD AVFLALKLIA PDAEVVVSGV NVGENVGVEA TFGSGTVGAA IQAGVLGVPG
VAVSMEQGGD VQLMRRVAAA AVDAVGGGLG DAYAVSINIP AEWGGGLFCP ERLARVVYQE
RLYEGVDPRG EAFYWRWGPR RERLDAGTDA YYFYTERGIT VIGLWENGVA PVAEYAKRLG
SLLGVKYIKC