Gene Pcal_1930 details

Gene Information

• Locus tag: Pcal_1930
• ID: 4908329
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1797438
• End bp: 1797992
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640125681
• Product: hypothetical protein
• Protein accession: YP_001056812
• Protein GI: 126460534

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGGTCA GAATTTTGAC GCTGGTGGGC CTCGTCTTAA TATTGGCAAG CTACGCCTTC 
CCCTTCTGGT CCACTTATCT CTCTTCGCCG ATCTTCGGCT ATACGCGCCA GGTCTACATA 
AAGGTAATGC TCGCAGGATA CGTGGACTAC ACGCCGCCAG ATGCGTTGAT GCAGTTAAAT 
ATTGCGCACC ACTACGTGGG TCTGCCGCCT CTTGAGCCAG AGAAGATGAT TGAGCTTAAG 
TTAATTCCCC TGCTCCCCGC GGGGCTGGCC GCGGTGTATA TCTTGTATAT GTTGGGAAAA 
ATTAGGCTGA GGTGGGTCGC CCTAATCACG TACCTAGCCC TAATTGGCGG CGTCGCCTAT 
TTCCAATACT GGCTGTACAA TCTAGGCCAC AGCATACAGC CCGGAGCCCC TATAAAGGTA 
GAGCCGTTTA CTCCAATCGT TATGGGTACT TACCAAATTG CCAACTTCAC CGCGTTTAAC 
ATCTTAGACG TGGGCTTCTG GCTTCTTGCG GCGGCGCCTA TATTTGCATA CCTGGGGGAG 
AGGTTTAAAA TTTGA 

 

Protein sequence

MKVRILTLVG LVLILASYAF PFWSTYLSSP IFGYTRQVYI KVMLAGYVDY TPPDALMQLN 
IAHHYVGLPP LEPEKMIELK LIPLLPAGLA AVYILYMLGK IRLRWVALIT YLALIGGVAY 
FQYWLYNLGH SIQPGAPIKV EPFTPIVMGT YQIANFTAFN ILDVGFWLLA AAPIFAYLGE 
RFKI