Gene Pcal_1909 details

Gene Information

• Locus tag: Pcal_1909
• ID: 4908250
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1779924
• End bp: 1780463
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640125660
• Product: nitrate reductase molybdenum cofactor assembly chaperone
• Protein accession: YP_001056791
• Protein GI: 126460513
• COG category: [C] Energy production and conversion
• COG ID: [COG2180] Nitrate reductase delta subunit
• TIGRFAM ID: [TIGR00684] nitrate reductase molybdenum cofactor assembly chaperone

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGACCCCG TACAAGCAAT CTACATCACA ATAGCGAGGG CCCTGGACCA GCCCGAGAAG 
GCGCTTGAGG CAAGGCGCGA CGTGGAGGAA CTGGCCCACG CCCTGGGGCT GGAGGAGGTG 
GCCCAGTTCT TCAAAGAGGC TGAGGGCATA GATGTGGAAG ACCACCGCAT ATCTCTCTTC 
GAACTTGCGC CCAAGTGCCC CCCATACGCC GGGTATTACG CGCTTGGGGA AGACAGTAGG 
GAGAGGGGGT GGTACATGCA CCAAATCCTG ACCTATTACA GAGCCTTTGG CTTCGACATG 
GACGTGAGGC GGGAGCTCCC GGACTACCTC CCCGCCATGT TAGAATTCCT CGCCGTGTCA 
AGGAACGTGG ACGACCTAGG CAGAAAGCTG ATGAGGAAGG ACTTCTACAG GAGGTTTATA 
AAGCCCTGGC TAGACAAGTT TGTCCAATGT CTAGAAAAAC AAAAGAGCCC CTACAGACAC 
CTGGCCCACG CCCTTGTAAA ACTGTTAAAA GAAGATTTTG AGACTACTGA GACTACTTGA 

 

Protein sequence

MDPVQAIYIT IARALDQPEK ALEARRDVEE LAHALGLEEV AQFFKEAEGI DVEDHRISLF 
ELAPKCPPYA GYYALGEDSR ERGWYMHQIL TYYRAFGFDM DVRRELPDYL PAMLEFLAVS 
RNVDDLGRKL MRKDFYRRFI KPWLDKFVQC LEKQKSPYRH LAHALVKLLK EDFETTETT