| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1852 |
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| Symbol | |
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| ID | 4908300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1711014 |
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| End bp | 1711589 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640125602 |
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| Product | hypothetical protein |
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| Protein accession | YP_001056735 |
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| Protein GI | 126460457 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.677058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCCCG TCGGGAGACT AGTCCTTTGG ATAGTGCTAT ACGTAGTAGT AATGGCAATA
GTACAGGCAA TATTCCAATT CATAGCAGCG CCGCCCCTAT CGTTTACACA AGCCCTCGAC
TACAAAATAT ACGTCGACAT ACTCCTCACA CTGTTCTTCG GCTGGCAGAT AGTCAAAGCC
TTTGCAGATA TCGTGGCGCT CCCCGTTGCC AAGAAACAGG GCGAGACGGC AGGCCGCGCA
GTCTCAAACC TCATTAAGCT CATTGGAATA GGCGCCCTCG CCGCCGCCCT CGCCGGGGCA
GTATCCGGAG GCGCCGCCGC AGCGGCGCTA GGCGGCTTCA TAGGCCTAGT AATCGGCTTC
GCCACTCAGC AGGTATTGGG GCAAGCCGTT GCGGGAACGT TCCTCCTCTT AGCAAGGCCG
TTTAAAATCG GCGAAAAAAT CGTGGGCGCC GGTCAAGAGG GCGTCGTAGA AGACATCACC
GCCATGTATA CAGTGATTAG AGACGCCGAG GGCAACAAGG TGCTTATTCC AAACAACAAG
CTAATCGGCG ACATACTAAA GATCAAAAAG TCCTAA
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| Protein sequence | MNPVGRLVLW IVLYVVVMAI VQAIFQFIAA PPLSFTQALD YKIYVDILLT LFFGWQIVKA
FADIVALPVA KKQGETAGRA VSNLIKLIGI GALAAALAGA VSGGAAAAAL GGFIGLVIGF
ATQQVLGQAV AGTFLLLARP FKIGEKIVGA GQEGVVEDIT AMYTVIRDAE GNKVLIPNNK
LIGDILKIKK S
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