| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1841 |
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| Symbol | |
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| ID | 4908393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1700628 |
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| End bp | 1701527 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640125591 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001056724 |
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| Protein GI | 126460446 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.417621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACC TCGCACTACT GTTGCTCTAC CAGGCGCTCT TCGCCTCTGT GCCTATCCTC
CTGGCGTCGC TGGGAGAGAT ACTGACCGAG CGCAGCGGCG TGGTCAACAT AGGCCTCGAG
GGGCTTATGT TGCTAGGCGC CTTCTTTGGG CCACTCACCG CCGACTTCTT GAAATACCGC
CTAGGCCTCT CGCTTCCAGA CCCCTTGTGG CCCTTGGTGG CTCTGTTGGC CTCTGCGCTT
GTGGGAGCCG TAGTTGGGGC GCTACATGGG TACATATCTA CGTATCTCGC AGGGGATCAA
ATTATCAGCG GCATAGCCAT AAACCTCTTT GGAGCAGGCG CCGTGGCGTA CGGCATACAA
TCGTATTGGG GGGTAGCGGG CTATAAACAG GTGCCAGATT TTGTAAAAAC AGATCCCACT
GCCATTGCGG CGTTTGCCCT TGCCCTTGCC GCATTTATGT GGTTTCTCCT ATTTAAGACC
AGGCTTGGCA TTGTGATAAG GGCGTGCGGC GAAGACCCCG AGGCTGCCTT TAACATGGGT
GTGGACGTGG ACAAGGTGAG GCTCTTTGCC ACAATTGCGG GCGCAGTTCT AGCCGCCTTA
GCCGGCGCAT ATTTGAGCAT CGCATATCTC TCAGTTGTAA CTAAGGAGGT TTCGGCTGGG
AGGGGCTTTA TAGCGCTTGC CAATGTGGTA TTTGCAAACT GGAACCCCGC CCTAGCCGTT
GCCGGCGCCT TTATCTTCGG CTTCTTTGAC TCCTTGTCCT ACTGGCTACA GACGCTGGGC
GTGGCGCGGT ACGAGTTGAC GAGGATTATT CCATACGTGG CCACTTTGCT AATAGTCGCC
GGCGCGATAG GCAGGGCTAG GCCGCCCAGG GCGGTGGGGA AGGCCTTCAG AAAAGAATAA
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| Protein sequence | MTDLALLLLY QALFASVPIL LASLGEILTE RSGVVNIGLE GLMLLGAFFG PLTADFLKYR
LGLSLPDPLW PLVALLASAL VGAVVGALHG YISTYLAGDQ IISGIAINLF GAGAVAYGIQ
SYWGVAGYKQ VPDFVKTDPT AIAAFALALA AFMWFLLFKT RLGIVIRACG EDPEAAFNMG
VDVDKVRLFA TIAGAVLAAL AGAYLSIAYL SVVTKEVSAG RGFIALANVV FANWNPALAV
AGAFIFGFFD SLSYWLQTLG VARYELTRII PYVATLLIVA GAIGRARPPR AVGKAFRKE
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