| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1833 |
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| Symbol | rpl1P |
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| ID | 4910076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1695857 |
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| End bp | 1696525 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640125583 |
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| Product | 50S ribosomal protein L1P |
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| Protein accession | YP_001056716 |
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| Protein GI | 126460438 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.927774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCCG TAGTTCAAAG GGAGGCCTTG TTGAAAAAGA TTGACGAGGC TCTCAAGTCT
GGGAAAAAGA GGCGGTTTAG GCAGAGCGTC GAGCTAATAG TGGTGCTTCG AGGCATCGAC
TTGAGCAAGC CCGAGAATCG TATCAACCTC CTGGTGGAGT TGCCCCACCC GCCTAAGCTC
AATAAGATTG CCGCGTTTGC CCATGGCGCC TTTGAGACTC AGGCCAAGAA CGCGGGAGTT
GACGCCGTTA TTACGAGGCA GGAGGTGGAG GGCCTGGCTG GAAACAAGAG GGCCATTAGG
AAGTTGGCTA AGCAGTACGA CTTCTTTATA GCTCCTCCCG ACTTAATGCC GCTGTTAGGC
AGAGTGATAG GCCCAATCTT TGGCCCAAGG GGGAAGATGC CCGAGGTCGT GCCGCCGAAC
GTCGACGTTA AAACCGTGGT AGAGAGGCTG AGGAGAGTTG TGCGCGTGAG GCTGAGGAAT
GAGCCAGTGA TAAAGGTGAG AGTTGGCGCA GAAGGGCAGA AGCCTGAGGA GATCTTGACA
AACATACTCG CAGTGCTCGA GGAGCTAAAT AGGAAGTTCC CGCTACGCCA GTACCTCAGA
GACATATACA TCAAGAAGAC CATGTCGCCG CCTGTGCGAA TTAAGCCGGC TGAGGTTTTA
GCGCGTTGA
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| Protein sequence | MSAVVQREAL LKKIDEALKS GKKRRFRQSV ELIVVLRGID LSKPENRINL LVELPHPPKL
NKIAAFAHGA FETQAKNAGV DAVITRQEVE GLAGNKRAIR KLAKQYDFFI APPDLMPLLG
RVIGPIFGPR GKMPEVVPPN VDVKTVVERL RRVVRVRLRN EPVIKVRVGA EGQKPEEILT
NILAVLEELN RKFPLRQYLR DIYIKKTMSP PVRIKPAEVL AR
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