Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1795 |
Symbol | |
ID | 4909756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1663085 |
End bp | 1663375 |
Gene Length | 291 bp |
Protein Length | 96 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640125544 |
Product | transposase, IS605 OrfB |
Protein accession | YP_001056678 |
Protein GI | 126460400 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0855799 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTCAAC TCTCTTCTCT TCTTTGTTCA GCCCTTCTCC TCCTCTCCAA GTGGCAAGCC GCGAAGCGCG GCGTGATGGT AGTCGAGGTG GACCCAAGCG GCGCGTCCAC AACGCGCACC AAGTGCTGCA GGAAAATGGA AGAAGTGGGA CACAGAAGAA TGAAGTGCAC AACATGTGGC TTCGAGGCTT GGAGAGACGT AGTGGCACTG TTAAACATTG AAAAAAGGCT TGCAAGAGGT TGGGCACCCC CCGCTTTTTT CCCACTGATC GCTTTGATCC CCGTTGTTTA A
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Protein sequence | MSQLSSLLCS ALLLLSKWQA AKRGVMVVEV DPSGASTTRT KCCRKMEEVG HRRMKCTTCG FEAWRDVVAL LNIEKRLARG WAPPAFFPLI ALIPVV
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