Gene Pcal_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1795 
Symbol 
ID4909756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1663085 
End bp1663375 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content53% 
IMG OID640125544 
Producttransposase, IS605 OrfB 
Protein accessionYP_001056678 
Protein GI126460400 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0855799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTCAAC TCTCTTCTCT TCTTTGTTCA GCCCTTCTCC TCCTCTCCAA GTGGCAAGCC 
GCGAAGCGCG GCGTGATGGT AGTCGAGGTG GACCCAAGCG GCGCGTCCAC AACGCGCACC
AAGTGCTGCA GGAAAATGGA AGAAGTGGGA CACAGAAGAA TGAAGTGCAC AACATGTGGC
TTCGAGGCTT GGAGAGACGT AGTGGCACTG TTAAACATTG AAAAAAGGCT TGCAAGAGGT
TGGGCACCCC CCGCTTTTTT CCCACTGATC GCTTTGATCC CCGTTGTTTA A
 
Protein sequence
MSQLSSLLCS ALLLLSKWQA AKRGVMVVEV DPSGASTTRT KCCRKMEEVG HRRMKCTTCG 
FEAWRDVVAL LNIEKRLARG WAPPAFFPLI ALIPVV