| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1794 |
|---|
| Symbol | |
|---|
| ID | 4909467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | - |
|---|
| Start bp | 1662317 |
|---|
| End bp | 1662817 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640125543 |
|---|
| Product | thiol:disulphide interchange protein, putative |
|---|
| Protein accession | YP_001056677 |
|---|
| Protein GI | 126460399 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1651] Protein-disulfide isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0574942 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATATTCA GGAGACGCAA GCCCAGCCTC ACCCCAGTGG TCAAGACAGA GGTGGTTAAG
AAAATTGTGG AAATTGCGCC TATTAAAGTG GGAAGTGGGA ACAGGGCCGT AGTCGTATTC
TTCGACTTGA AATGCCCCTT CTGCGCAAGG CTCTTCAAGG AGACTGAAGA GGTCATGCTA
GAAATGGCCA AGAACGGCTT GATAACATAC GCAATGTGCG ACTACGTGGT CCATAAAGAC
GCCGAGTCTC TACACAGGGC CCTCCGCTGC ATCGAGGCAG AAAAGAGGCT GGACTTCGTT
AAAAGGATAT ACAGCGGCGA AAGGGTAAAA GCAGACGAGT GTCCAGCAGA CGACTTAAAG
GTCTGCGAAG AGCTCGCCGA GGCTGTTGGA GTCTACGGGA CGCCGACCCT GCTCTTCTAC
GACTTCTCCA AGGGCCGTGG GTATATACAC TTCGGCTACA TGACGCCTGA CCAGGTGCTG
GAGGCCATAT ATGCCCTATG A
|
|---|
| Protein sequence | MIFRRRKPSL TPVVKTEVVK KIVEIAPIKV GSGNRAVVVF FDLKCPFCAR LFKETEEVML
EMAKNGLITY AMCDYVVHKD AESLHRALRC IEAEKRLDFV KRIYSGERVK ADECPADDLK
VCEELAEAVG VYGTPTLLFY DFSKGRGYIH FGYMTPDQVL EAIYAL
|
|---|
| |