| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1788 |
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| Symbol | |
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| ID | 4909601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1657954 |
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| End bp | 1658811 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640125537 |
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| Product | hypothetical protein |
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| Protein accession | YP_001056671 |
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| Protein GI | 126460393 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00651163 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTCCGC GGGTTAGGAC GTATGTGCCT GGCCTAGATG AAATTCTATT TGGAGGAGTA
CCTGAGAGAA GCGTAGTGCT ACTGAGCGGC GGCCCGGGCA CTGGCAAGTC CATTCTGGGG
AAGCAGTTCC TCTTTAATGG GCTTAAGAGG GATGAGCCCG GCATCTTCGT AGCCTTGGAG
GAACACCCCG TGGCTGTGCG CCGGAGCTTC CGCCACTTTG GCTGGGACGT GTCTCAGTAC
GAGAAGGAGG GCAAGTTCGC CATTGTAGAC GCGTTCACCG GCGGAGTCGG CGCCGCGGCT
CAGAGGGAGA GGTATGTGGT TAAGCAAGTG GACGATGTGC ACGAGCTCAG CGACGTGCTT
CGACAGGCGA TAAAGGAAAT CGGGGCCAGG AGAGTCGTTG TAGACTCGGT GTCTACGCTT
TATCTCACCA AGCCGGCGGT GGCCCGGTCC ACCATAATGT TGCTAAAGCG GGTATTGGCC
GGGCTCGGTT GCACTGCCTT TTTCGTGTCG CAGGTGTCCG TGGGCGAGAG GGGGTTTGGA
GGACCTGGCG TAGAGCACGC GGTAGACGGC ATCATAAGAC TTGACTTAGA CGAAGTCGAT
GGAAAGCTGT ACCGCTCCAT AATAGTCTGG AAGATGCGCG ACACTAAGCA CTCCATGTTG
AGACACCCAA TGGAGATAAA AGACACGGGG GTGGAGATCT TTTGGGACAA ATACATAAGG
ATCTCTGGCA CCTCTGTAAA AGTGGAGCAG TTGTCAAAGG AGGAGGTGGA GGCCATGCGT
AGGGCCGTGG AGGAGGCCGA GCGTCAAACA AGTCAAGCAA GGCAACGAAA AGTTGAAATA
GAGGTAGAGG AGGAGTAG
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| Protein sequence | MVPRVRTYVP GLDEILFGGV PERSVVLLSG GPGTGKSILG KQFLFNGLKR DEPGIFVALE
EHPVAVRRSF RHFGWDVSQY EKEGKFAIVD AFTGGVGAAA QRERYVVKQV DDVHELSDVL
RQAIKEIGAR RVVVDSVSTL YLTKPAVARS TIMLLKRVLA GLGCTAFFVS QVSVGERGFG
GPGVEHAVDG IIRLDLDEVD GKLYRSIIVW KMRDTKHSML RHPMEIKDTG VEIFWDKYIR
ISGTSVKVEQ LSKEEVEAMR RAVEEAERQT SQARQRKVEI EVEEE
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