| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1721 |
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| Symbol | |
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| ID | 4909676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1604660 |
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| End bp | 1605958 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640125468 |
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| Product | general substrate transporter |
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| Protein accession | YP_001056604 |
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| Protein GI | 126460326 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.675628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAA AGGGTAGAGA GGCTGTGGTT ATGTCTCTGC GGTTTATAAC AGCGGCGTCT
ACCATCGGCA CGTTGATTGA GTGGTACGAC TTTTTTGCAT ACGCATCAGT GTCGCCCTAC
ATATCCGCTA AGTTTTTCCC AAAGGGGGAT CCAATAGTCG CTTCGCTTCT CACGTGGCTC
ATATTCGCCA CGGCCTATGT CGTCAGGCCG CTTGGCGCCG TCTTGTTCGG CCACCTGGGC
GACAGAGTGG GGAGGAAGGC CACCTTCCTC GCCACATTGA CGCTTATGGG GCTCTCCACG
TTTGCCATAG GCCTTTTGCC CACCTACGAA CAGGTCGGGG TACTGGCGCC CTTCCTCCTG
GCGCTTTTCA GGATACTCCA AGGCATTTCG CTGGGCGGCG AGTACGGCGG CGCGTTGACG
TACGTGTTAG AACACGCCCC TCCCAACCGC AGGGCCTTCT ACGCGGGATT TCTCTCCGCC
ACGCCTCCAG CCGGCCTCGC GCTGTCGTCG CTTACTCTTG TCTCAACCTC GCTCCTTCTG
TCGCGGGCTG ACATAGAGGC ATGGGGGTGG CGCGTCCCCT TCCTGTTCTC AATTGTGCTT
ACTATACTCG GCGTGTATCT AAGGCTTAGG CTAACCGAGA CTCCGCTGTT TGAGGCGGTA
AAGAGGGAGG GAAAGGTGGC CAAAGTGCCA GTGGTAGAGG CCTTTACCAA GTACTCAAAG
TGGATTGTAG TAGGCGTCGT GATAAGCGCC GGGCACGCGG TGCTGGCTTA CACCTCCACT
GGCTACATAT TCACATACTT GACCCAGGTG GCGAAGTTAG ATCCCTTAAC CGTTAACCTT
GTCGTCGGCG TGGCGGCGCT CCTCCAGTAC CCATTCTACA TAATAAACGC GTGGCTGGCC
GATAAGTATG GGAGGAAGAG GATTTACATG GCGGGGCTGG CACTGGGGCT TCTCACGTAT
TACCCAATCT ACCAGTGGCT GGGAACGGCG AGGGGATTGG CAGAGACTAT ATTCGCCGTG
TTCATCTTGA TATACGCAAC CGCGTTTACC TTCAGCGTCT TGGGCACGGC CATAGCGGAG
CTGTTCCCCA CTAGGGTGAG GTACACAGGA ATGTCTCTGA CATTTAATAT AGGAGTGGGA
GTCTTCGGGG GCTTTACTCC CACCGTTGTG CAACTCATAG GCATATCGCT ACAGAACCCG
CTGGCCGGGC TGATACTGTA CACCTACGTC GTGGCGGCGC TGGCGCTGGT CGTGGCCTAT
TTCTATCTGC CAGAGACTGC CGCCAAGAGG CTGGAGTAG
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| Protein sequence | MFKKGREAVV MSLRFITAAS TIGTLIEWYD FFAYASVSPY ISAKFFPKGD PIVASLLTWL
IFATAYVVRP LGAVLFGHLG DRVGRKATFL ATLTLMGLST FAIGLLPTYE QVGVLAPFLL
ALFRILQGIS LGGEYGGALT YVLEHAPPNR RAFYAGFLSA TPPAGLALSS LTLVSTSLLL
SRADIEAWGW RVPFLFSIVL TILGVYLRLR LTETPLFEAV KREGKVAKVP VVEAFTKYSK
WIVVGVVISA GHAVLAYTST GYIFTYLTQV AKLDPLTVNL VVGVAALLQY PFYIINAWLA
DKYGRKRIYM AGLALGLLTY YPIYQWLGTA RGLAETIFAV FILIYATAFT FSVLGTAIAE
LFPTRVRYTG MSLTFNIGVG VFGGFTPTVV QLIGISLQNP LAGLILYTYV VAALALVVAY
FYLPETAAKR LE
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