| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1702 |
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| Symbol | |
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| ID | 4909429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1585446 |
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| End bp | 1585874 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640125449 |
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| Product | thioredoxin domain-containing protein |
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| Protein accession | YP_001056585 |
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| Protein GI | 126460307 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | [TIGR01295] bacteriocin transport accessory protein, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00215418 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGGACGAGC TAGACCGCAT ACTCTGGAAA AAGGCCGTGG AACTTACGAG GGCCAAGGAC
CCGCCAAAGT GTTGCACCGT CAACTACCCC CCTGGCCACG TGCTCAGAGA CGTGGCCCAG
TTTAAGAACG CTGTAATGGG GTGTAAGGTT GCCTTCGTCA TGTTTTTTGG AAAGACGTGT
CCATATTGCG CCGCCTTTGA CCCCATCTTT CGACAAGTGG GAGAGAGGTA CAGACATATG
GCGAACTTTG TAAAAGCGGA CATAGAAGAG TTTTACCACA TAGCGGCATC TTTGGGCATT
ATGGCTACTC CTACGACAGT GGCGTTTATA AATGGGACCC CCGTCGAGGC CGCGCCTGGC
TTTATGACAG CGCCTCAATT TCGCACATTT GTGGAATCCG TACTAGAACA CGCCAGCTGT
AGAAGTTAA
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| Protein sequence | MDELDRILWK KAVELTRAKD PPKCCTVNYP PGHVLRDVAQ FKNAVMGCKV AFVMFFGKTC
PYCAAFDPIF RQVGERYRHM ANFVKADIEE FYHIAASLGI MATPTTVAFI NGTPVEAAPG
FMTAPQFRTF VESVLEHASC RS
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