Gene Pcal_1670 details

Gene Information

• Locus tag: Pcal_1670
• ID: 4909414
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 1558304
• End bp: 1558921
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 640125417
• Product: hypothetical protein
• Protein accession: YP_001056553
• Protein GI: 126460275
• COG category: [R] General function prediction only
• COG ID: [COG1634] Uncharacterized Rossmann fold enzyme

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.000666865
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGTGCAAGC CGGCGATCTT TGACCCACTG GAGTGGGCGT ACGTCAGATC GCTGGCGATT 
AGCCTTCTCC CAGAGCTCTC ATTTCACAGA GACGAAGAGG CGACCCGCAC CGCCGCATCG 
CTTGAGGGAG TCGACATTGG GGTATTGAAG GACTTCGACT GGGGAGAGCC GGTGGTCTAC 
ATGCCGCCCT TTGAAAAAGT AGTGGGGGGA AGCGTGGTAG TGGCCGTGGA GGGCTACTCG 
GCCAGAAAGC TGGCGACGAG GGGCATCAAG CCAGATGTCG TTGTGACAGA CTTGGACTTT 
GAGCCAGAGT GGGTTGGGGC CGGGAGAGTG GTCGTGGCGC ACGTCCACGG AGACAACTAC 
TGGAGAGTAC CAAAGAGGGA CTGGGTGTAC ACAGTGCAGA CATGGCCGAG GGGCTGTACC 
TTCAACATAT CGGGCTTCAC AGACGGCGAC AGGGCCGTCT ACCTGGCCTA CTACATGGGC 
GCCGAGAGGA TAGCCGTGTC GGGGTTTTAC CCATATGCCA CTGTGAAAAG GGCCGACTCA 
CTAAAGCAGA GAAAGCTCTT TGTAGCCGCA CACCTGTTGG CTAGGCTGTC ACGTAGAGTG 
CGCATAGACT TTGTCTAA 

 

Protein sequence

MCKPAIFDPL EWAYVRSLAI SLLPELSFHR DEEATRTAAS LEGVDIGVLK DFDWGEPVVY 
MPPFEKVVGG SVVVAVEGYS ARKLATRGIK PDVVVTDLDF EPEWVGAGRV VVAHVHGDNY 
WRVPKRDWVY TVQTWPRGCT FNISGFTDGD RAVYLAYYMG AERIAVSGFY PYATVKRADS 
LKQRKLFVAA HLLARLSRRV RIDFV