| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1642 |
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| Symbol | |
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| ID | 4909364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1530702 |
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| End bp | 1531886 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640125389 |
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| Product | hypothetical protein |
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| Protein accession | YP_001056525 |
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| Protein GI | 126460247 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGGCAT TAGACAAGTA TATAAAAGGA TGCGGCGTAG AGGCCGTGGA CCACGTACTG
ATGCTCGCCT TAGGAGACTT GAAGTCGAGG GCCTTGCGAT ATTTGTTGAC AGCAGTCGCC
ATAGGCGTCG GCGTAGCGTT GCTGGTGGCC TTAACCGCCG TCAGCGACGC CACGAGGGCC
TACGTGGAGC AGACGCTTTA CAAAGTCTAC CCAGCCGATA TTATGATGTA TTCAGACTCT
ATAAATATCC CACAGCGGCT TGTGGACTTG CTCCAGCGTA ACCCCGCCGT AAGTGGGGCA
GAGGGGATCA TAATTACCAC CGGCGTTGTG AATGGGCAAG TGGTATCTAT CGTGGGGATA
CCTCTTAGAG ACGTCGACTA CTTCGCCATT GACTTAAAGG AGGGGAGACT CCCCTCCTCG
GGGGGCGAGG CCGTTGTAGA AGAGTCACTC GCCGCGCGGC CCGGCGACAC TATCACGATT
AAGGTGTACT CAGGCGCCTT GGGCGGGGAG AGGACAGTCA CGGTTAAGGT GGTGGGTGTT
ATGAGGAGCT TCTTAAGGGG CTTCATAGGC GCCTTTAGGC TAAATCTGGT GGTGGTTCCC
CTTGACTGGC TTCAGGAAGA GCTGGGGGCT GGCCCCTTCG TCAACGCCGT CTTGATAACG
CTCAGAGACA AGGGGTATGT AACGCCTTTT TACAAGACGC TGAAAGAGAC GTTCCGAGAT
GCCCAGGTGT ATACCCAAGA GGCTCTGTTG AATACAGTAT CCCAGGTCTT CAACGCTTTG
AACTTCGTCT TCACTGTGAT AAGCGCCGCG GCGCTTGCCA CAGCCGCCGT GACGACCTTC
GCCGTCATGT CTATCACTGC CAGGGAGAGG CTTAGGGAAT TCGGCTTGCT CAAGGCCGTG
GGCATTTCGT CTTCCGACAT CGTCGTGTCC GTGGCTGTGG AAGTGGCGTT GCTAAGCGTG
GCCGCCGGGA TCGCCGGCGC GGCGCTGGGC TTCTACGGCG CCACGCTTGT CAAACAAATT
TTGATAGGTA TGGGCGTCAA CTTCGACGTC CCCATAGAGT TCAAGCTCCG CTACATCGCC
CTAGCCCTGT CAGCCTCTCT AGCAGTAGCA TTAGCGGGGG CCGCCTCGCC GCTGTATAGA
GTGGCAAAGT TGCGGCCTAT TGAGATACTT CAGCTATGGC GGTAG
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| Protein sequence | MGALDKYIKG CGVEAVDHVL MLALGDLKSR ALRYLLTAVA IGVGVALLVA LTAVSDATRA
YVEQTLYKVY PADIMMYSDS INIPQRLVDL LQRNPAVSGA EGIIITTGVV NGQVVSIVGI
PLRDVDYFAI DLKEGRLPSS GGEAVVEESL AARPGDTITI KVYSGALGGE RTVTVKVVGV
MRSFLRGFIG AFRLNLVVVP LDWLQEELGA GPFVNAVLIT LRDKGYVTPF YKTLKETFRD
AQVYTQEALL NTVSQVFNAL NFVFTVISAA ALATAAVTTF AVMSITARER LREFGLLKAV
GISSSDIVVS VAVEVALLSV AAGIAGAALG FYGATLVKQI LIGMGVNFDV PIEFKLRYIA
LALSASLAVA LAGAASPLYR VAKLRPIEIL QLWR
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