Gene Pcal_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1626 
Symbol 
ID4909455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1514831 
End bp1515628 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content59% 
IMG OID640125373 
Productagmatinase 
Protein accessionYP_001056509 
Protein GI126460231 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID[TIGR01230] agmatinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAGA GCGTCTGCCG CGAGGGAGAC GTAAAGCTGT TCGGCGCGCC GATGGAGGAC 
ACCGTCAGCT TTAGGCCGGG CACTCGCTTT GCTCCACAGA AAATACGGAG CATTCTGCCG
TATCTAGAGT ACACGACTGT CCTCGGCAAC GTGGCAAAGC CGCTCTGCGA CCTCGGCGAC
GTGGAGCTAC TGCACGGGGC GCCCGGCGAA AACGTGTCGC GGATAGAGGC CTTCATTAGG
AAGACTACGC CGCCCTTTAT AATGCTGGGT GGCGAACACA CGGCTACGCT TGCCGCACTG
AGGGCGCTGA GGCCCGACGT GTATGTCCAC ATAGATGCCC ACTTCGACCT CCGCGACGAG
TGGCCGCCTG GGCAAAAGCT ATCCCACGCC ACTTTTGCAA GAAGGGCGCA CGAGGAGTTG
GGCTTCTACG CCTTGTACAT AGGGGTCAGG GCATACGACG ACGAGGAGTA CAAATACGCA
AAAGAGGCAG GCTTCTACGT GGTAGAGGGG TCAGACTTCA CGAGGTCCGA GGTGGCAGAC
GCCGTGGCAA CTGCCTCGGG GAGAGTGTAC TTAAGCCTAG ACATAGACGT CTTAGACCCC
TCCGAGGCGC CAGGCGTGGG GACGCCGGAG GCCGGCGGCC TCTCCTTTAG AAAACTGGAG
CTCCTACTGG CCGACTTAAT GCTCTCTTTA AAGCCCGTGG CCGTAGATGT CATGGAGTAC
AGCCCCCCGT TCGACGTCTC CGACATAACT GCGGCGAAGG TGGTGAGGAT ACTAATGCAC
ATTTCTTCTC TGCTTTAG
 
Protein sequence
MLKSVCREGD VKLFGAPMED TVSFRPGTRF APQKIRSILP YLEYTTVLGN VAKPLCDLGD 
VELLHGAPGE NVSRIEAFIR KTTPPFIMLG GEHTATLAAL RALRPDVYVH IDAHFDLRDE
WPPGQKLSHA TFARRAHEEL GFYALYIGVR AYDDEEYKYA KEAGFYVVEG SDFTRSEVAD
AVATASGRVY LSLDIDVLDP SEAPGVGTPE AGGLSFRKLE LLLADLMLSL KPVAVDVMEY
SPPFDVSDIT AAKVVRILMH ISSLL