| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1593 |
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| Symbol | |
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| ID | 4908470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1478734 |
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| End bp | 1479975 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640125341 |
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| Product | 3-isopropylmalate dehydratase large subunit |
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| Protein accession | YP_001056477 |
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| Protein GI | 126460199 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTACGT GGACCGAGTA TATATTCTAT AAAAAGCTGG GGAAGGCCCC GTCGCCGGGG
GACGTGGTGG AGGTGGTGCC AGACTTGGTG GGGTTCCACG ACTTGACTGG GTACCACGTC
CTCGAGGTGT TGGAGCAGAT GGGGAAGGTC GAGGTGTTTG ACAGAGGGCG CGTCGTCGTG
GCGTTTGACC ACTTGGCGCC TCCGCCGACG CAGAGGGCTG CGGAACTTCA GGTCTACATA
CGTAGGCACG TGAAGGCGCT GGGCCTCCCC CACTTCTACG ACGTCGGCGG GGGGATTTTG
CACCAGATCA TACTGGAGAA GTACGCCATG CCTGAGCAGG TCATATTCGC CGCCGACTCT
CACACCAACA CCGCCGGCGC CGTGGGGGCC TTCGCCCAGG GCCTGGGGGC CACCGACATC
GCCGCTGCGT TGAAGCTGGG CAAGACTTGG CTGGTGGTCC CCACGCCGTT TGCGGTAAGG
GTCGTCGGCG AGTTTCCCAA GGGCGTGATG GGCAAAGACG TGGCGCTCCA CCTCCTCGGC
GCCTTCGGCG CAGAGGGCTT CAACGGCTAC TCCGTGGAGG TCACCGTGGA GAAGCCCAAG
GCCTTCCCCA TGGACGACAG AGCCACCGTG GCCAACATGT CCACGGAGAT GGGCGCAGAC
GCCCTCGTGT TCATCCCCGA CGAGGTCACT GTGGCCTATC TACATGAGGC CAGGGGCGTA
AGCTACAAGC CCCCCGCCCT CGGCGGCGGC AAATACGCGG ACGAGTACAC GGTGGAGCTC
GGGAGGCTGG AGCCCCTCGT GGCGGCGCCC CACAGCGTAG ACAACGTAAA AGCCGTGGCA
GAGGTGGAGG GCATCGAGGT GGACCAAGTC TTCATTGGAA GCTGCACCAA CGGCCGCCTC
AGCGACATAG AGGTGGCGGC CAAGATCCTA AGGCACGGGA GAGTGAAGGC GAGGTGCATA
GCCATCCCCG CCAGCTACGA CGTGTTTAGG AGGGCCATGG AGCTCGGCTA CGTAGACGTC
TTGACCAAGG CGGGTTGTGT TGTCACATAC GGCACCTGCG GGCCCTGCCT CGGGGGACAC
TTCGGCGTGG CTGGGCCAGG CGAGGTAGTC CTCACGACGA GCAACAGGAA CTTCAAGGGG
CGCGTGGGGC ACCCAGACTC AAAGGTCTAT TTGGCGAACC CAGCCGTGGC GGCGGCCACC
GCGTTGACAG GCCGCATCAC AGACCCACGC CAGTACCTTT AG
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| Protein sequence | MPTWTEYIFY KKLGKAPSPG DVVEVVPDLV GFHDLTGYHV LEVLEQMGKV EVFDRGRVVV
AFDHLAPPPT QRAAELQVYI RRHVKALGLP HFYDVGGGIL HQIILEKYAM PEQVIFAADS
HTNTAGAVGA FAQGLGATDI AAALKLGKTW LVVPTPFAVR VVGEFPKGVM GKDVALHLLG
AFGAEGFNGY SVEVTVEKPK AFPMDDRATV ANMSTEMGAD ALVFIPDEVT VAYLHEARGV
SYKPPALGGG KYADEYTVEL GRLEPLVAAP HSVDNVKAVA EVEGIEVDQV FIGSCTNGRL
SDIEVAAKIL RHGRVKARCI AIPASYDVFR RAMELGYVDV LTKAGCVVTY GTCGPCLGGH
FGVAGPGEVV LTTSNRNFKG RVGHPDSKVY LANPAVAAAT ALTGRITDPR QYL
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