Gene Pcal_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1582 
Symbol 
ID4909913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1471749 
End bp1472186 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content59% 
IMG OID640125330 
ProductPaREP1/PaREP8 domain-contain protein 
Protein accessionYP_001056466 
Protein GI126460188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAAGG CCGTGGCGCA GAGGCGCGGT AAGTCCGTAG AACAGTCGCT GGTTGACGCC 
GTGTTGCGAG AGCTAGACCC GCAGGAGAGA GCCGTCGTCT ACTTGAGGCT GGCGGAGAAG
TACCTCGCCG AGGCTGAGGA GCTTTACGCA AGGGGCGACC TAGTGCAGGC GGGGGAGAAG
TACTGGGGGG CTGTGGTCGC GCTGTTGAGC GTTGTAGCAG AGAAGAGGGG GATGCCGAAT
TACACGCAGA GAGGCTTGTG GGAGGCGGTA GAGGCGTTGG TGGAGGAGAC TGGGAATCCG
GAGTATTCAA CGCTGTTCAG CATCGCCGAG AAGCTACATG CGAATTTTTA CCACAACTTC
CTCAAAAAGC CCTCCTTTGA CAGACACAGA GAGGAGGCGC TGAGGCTTGT GGAAATGTTA
AAGCGGCTGG CCGCCTAG
 
Protein sequence
MAKAVAQRRG KSVEQSLVDA VLRELDPQER AVVYLRLAEK YLAEAEELYA RGDLVQAGEK 
YWGAVVALLS VVAEKRGMPN YTQRGLWEAV EALVEETGNP EYSTLFSIAE KLHANFYHNF
LKKPSFDRHR EEALRLVEML KRLAA