Gene Pcal_1579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1579 
Symbol 
ID4909669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1468400 
End bp1468909 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content57% 
IMG OID640125327 
Producthydrogenase maturation protease 
Protein accessionYP_001056463 
Protein GI126460185 
COG category[C] Energy production and conversion 
COG ID[COG0680] Ni,Fe-hydrogenase maturation factor 
TIGRFAM ID[TIGR00072] hydrogenase maturation protease 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCC TGCGCGTTGT AGGACTGGGA AACCCCATCT ACGGCGACGA CGGGGTCGGC 
TCCTGCCTCG CCCAAGCCCT CTCCCGTTTT AACCCCTTTG TAATAGATGG AAATGCACAC
GGCATAGGCA TTTTGGGCAA TCTCACAGAC GCAGAGGTCT TAATATTCCT CGACATAGAT
ACGAAGCTCC CGCCGGGGGC CGTAGCTCTT GAGGAGATCC ACGGCTCTTT GACGGTGGAG
GAGACCCGCC TCATTGACGC CCATAGGGCC CCTCCCTCGC TTCTCGTGGG ATATCTGAGG
GCCATGGGTA AAAACGTAAC CGCTTACCTC GTGGCCATTG GGCCCAGCAG AGTGGAGCCT
CTTGCCCCGC CGTCTAAGGA GGTGTTAAAC GCGGTGCCCA CCGCCGTGTC CCTATTGAAA
GAGGTGGTGG CAAAGCACGG GGTAGAGCTG AAGGCAGACT TTGACGCAGA GAGAGAGGTA
GAGGAGTGTT ATAAGAGGGT GTTGGGATGA
 
Protein sequence
MERLRVVGLG NPIYGDDGVG SCLAQALSRF NPFVIDGNAH GIGILGNLTD AEVLIFLDID 
TKLPPGAVAL EEIHGSLTVE ETRLIDAHRA PPSLLVGYLR AMGKNVTAYL VAIGPSRVEP
LAPPSKEVLN AVPTAVSLLK EVVAKHGVEL KADFDAEREV EECYKRVLG