| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1578 |
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| Symbol | |
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| ID | 4910156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1466505 |
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| End bp | 1468421 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640125326 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_001056462 |
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| Protein GI | 126460184 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACTA TAAAAATTTG GATTGACCCA ATTACCCGCA TTGAGGGCCA CCTAGCGCTG
TACGCAGAAG TTGACGCGAA CACCCGGCGC GTTGGCAAGG CGCACACGTC AGTGATGATG
TTTAGAGGCT TTGAGGTCTT CTTGAGGGGT AGGCCGCCTG AGGATGCCAT TGCCATTACT
TCGCGCACGT GTGGCGTCTG CGGCGCTGCA CATGCTAACG CGTCGACGAG AGCTTGCGAC
ATTGCGTCGG GCTTTACGCC GTATCCCATG GGCTCGGTGT TGAGAAACTT GGCCTACGCC
ATGACCGACT ATACCTACGA CCACCCGCTT ATCTTAAACA TGTTGGAGGG CCCCGACTAC
AGCGAGGCAA TCGTCAGCAA GCTCACTCCC TCTGTGTGGA AGATAGCCCA AGAGACCCCT
GCCAAGTACA GCGACATCCA CGGCTATAGA ACTATTGCAG ACATTATGCG TGACTTAAAC
CCAATAACTG GCAGAATATG GCAATTGACT GTCAAGTACC AGCGTATTGC GAGAGAGGCC
GGCGTGTTGA TATACGGCAG ACACTCACAC CCAGCCACGC TGATCCCAGG CGGCATCGCC
ACCGACATAA CGAACTTACC CAGCCTACTG CAGGAATACT ACGCAAGGCT GAGCGTGCTC
ACGGCGTGGG TTAAATTTGT GTGGGCCATA TGGCAGGAGC TCTACGAGTT CTACCGCGAC
CACGTCTCTA CGCCAGATGG ACAGTCCTAC GCCTTGACCC AGGGCAAGAC CCACGACCCG
TATGTTCTAC TCGCGGGCGG CTTCGGCGAC GATCCAGAGG TCTACAGCAA CGCGGCTGAC
GAGGCTAAGG GAGATTGGCG CGAGCTGTAT GCAAAATTGG ACGAGATCTA CAACGCGAGG
GCCGAGAAGC CGGGGCTCGC GGTCGGCGGC GAGCTTTACA GCAAGAGCGT CATTGAGCTA
AACCTCGGCT ACATGGAGTT TGCCGACTCT TCCTTCTACG AGGACTGGGT CAAGGCAAAC
GTGGCACCTC CCTACGGTTG GCTTGACAAA GACCCGTTAG GGAACCCGCT GGCATTTGGC
ACAGAGCTGT ACAAGTACCA CATGTGGAAT AGGACAACGA TGCCGAAGCC CGGCGCCATA
AACTTCGCGG ACAAATACAC ATGGGCGGCC GAGGCCAGGC TAATGTTGAG AGACAAGAGA
ATTGCACCAA TAGAAACTGG GCCCATATCT CAACTGGCGT TAGATACCCT CCATGCCACA
AAGTTTGACT TAGGTGGGCA GGTGTGGTGG GAGAGCAATG GGAGCGTCCT CAAGGTCCAC
CTGCCTGGGG GCACGGTCGC CGACGATCTA CCCCCTGGCA CAGCCCAGGA GTTAACGATC
GAGTGGAGGT TGCCCAAGTA CTCCACCACA TTTGAGAGAC TGTTGGCGAG AGCCGTCCAC
CTAGCGGTGG TCAACGTAGT GGCGTGGGCT AACTTGCTCT ACGGCCTCGA GTTAGTGAAC
CAGGGGAGAG TGCAAACGTC TAGGCCTTGG TCTTATGGGA AGTGGCCCAG CTTCAGCTAC
AGCTTCGGCT GGCACCAAGT GCCCAGGGGC AACTGTATGC ACTGGCTTGT GCAACAGAAT
GGGCGTATTG TCAACTACCA GTACGAGGCG CCGACTACGC CCAACGTGAG CCCGCGCAAC
AACCGTTGTA CAGACCCCTG GAAGAATCAG TGCGCCGGTC CGTTTGAGAT GTCTGTGATA
AACTCCGTAG TTACAGAAGA GGTGCCGCCA GACCAGTGGA CTGGGCTAGA CCTCGTAAGG
GCTATCAGGA GCTTTGACCC ATGTCTAGCA TGTGCAGTGC ACTTTGAGGC AAAGGGCGAG
GGCGGCAGAG TGTATACCAC TATTGAGAAA GTTATATGGA ACGCCTGCGC GTTGTAG
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| Protein sequence | MSTIKIWIDP ITRIEGHLAL YAEVDANTRR VGKAHTSVMM FRGFEVFLRG RPPEDAIAIT
SRTCGVCGAA HANASTRACD IASGFTPYPM GSVLRNLAYA MTDYTYDHPL ILNMLEGPDY
SEAIVSKLTP SVWKIAQETP AKYSDIHGYR TIADIMRDLN PITGRIWQLT VKYQRIAREA
GVLIYGRHSH PATLIPGGIA TDITNLPSLL QEYYARLSVL TAWVKFVWAI WQELYEFYRD
HVSTPDGQSY ALTQGKTHDP YVLLAGGFGD DPEVYSNAAD EAKGDWRELY AKLDEIYNAR
AEKPGLAVGG ELYSKSVIEL NLGYMEFADS SFYEDWVKAN VAPPYGWLDK DPLGNPLAFG
TELYKYHMWN RTTMPKPGAI NFADKYTWAA EARLMLRDKR IAPIETGPIS QLALDTLHAT
KFDLGGQVWW ESNGSVLKVH LPGGTVADDL PPGTAQELTI EWRLPKYSTT FERLLARAVH
LAVVNVVAWA NLLYGLELVN QGRVQTSRPW SYGKWPSFSY SFGWHQVPRG NCMHWLVQQN
GRIVNYQYEA PTTPNVSPRN NRCTDPWKNQ CAGPFEMSVI NSVVTEEVPP DQWTGLDLVR
AIRSFDPCLA CAVHFEAKGE GGRVYTTIEK VIWNACAL
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