Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1547 |
Symbol | |
ID | 4909909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1442728 |
End bp | 1443468 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640125295 |
Product | hypothetical protein |
Protein accession | YP_001056431 |
Protein GI | 126460153 |
COG category | [S] Function unknown |
COG ID | [COG2512] Uncharacterized membrane-associated protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGGCGT TGCTCAATCT CACTGCTCCG CCGGTTTTGC TCTTGTTTTT GCCGGCGGCT TTGGTTGGCA ATTACACGCT TCCCGTCCCT CCGGCGTCTG AGGTGGCGGC TTTTTCGCCC GGCGGGGCTC CTCTGCCCAC TTGGGTCTTG AACGGGACGC TCTACGTGTT GCAAGGCGGC GAGCCGGCGG TGGCTGTGTA TGTGCCGAGG TTTTTCAACT CCAGCGGCGT CTACAGCGTG GCGGTGGAAG GCCCCTTTGT GGCACAGGCG CCGCCCGGGG TAATGGTGGT AGAGGCTAAG CCACAGCCGG CGAGGGTGGC AGTGAACAAG ACGGGGCTAT ACCTATACTT CGACACAGGA GCCACAATCG CCTACCAAGC CTTCACCATA CAGCCGACTC CCACAACAAG CCCACCTCCA GCGACGACCA GCCCAACTAC GCCTACCCCG CCGATTGAGT GGTTGCTTGT GGCCGTGGCG GTGGCTGTTG TCGCAGTGTT GGCAGTGGTG TTTGCCAGGA GGAGGCGCGG CGGCTGTGGG GATCTGGGCG ACGTGGACTT GGCGTTGCTT AAGTTCTTGG AGTCTAGGGG CGGCTCGGCG GAGAGGGCGG AGCTACAGGC GGCGCTAAAT CTGCCAAAGA CCACGCTCCA CAGACACCTC CACAAGTTGG CTAGGTATGG CTATGTGAGA CTTGTGCAAG AGGGGCCGCG GCAGAGGGTA GAGCTCTTGC GCAAGTGCTG A
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Protein sequence | MLALLNLTAP PVLLLFLPAA LVGNYTLPVP PASEVAAFSP GGAPLPTWVL NGTLYVLQGG EPAVAVYVPR FFNSSGVYSV AVEGPFVAQA PPGVMVVEAK PQPARVAVNK TGLYLYFDTG ATIAYQAFTI QPTPTTSPPP ATTSPTTPTP PIEWLLVAVA VAVVAVLAVV FARRRRGGCG DLGDVDLALL KFLESRGGSA ERAELQAALN LPKTTLHRHL HKLARYGYVR LVQEGPRQRV ELLRKC
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