Gene Pcal_1535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1535 
Symbol 
ID4909446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp1432279 
End bp1432932 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content61% 
IMG OID640125284 
Productcobalamin-5'-phosphate synthase 
Protein accessionYP_001056420 
Protein GI126460142 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID[TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.055541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTGCC TAAGGGCGCT CCTCTCCTTC TTCACAATAA TACCGGCGGG AGTAGCCAAG 
CTGGACTTCA AATGCGCCTG GGCGCTCCCC TACGTGGTAC CCCCCTTAGT GGCGGGGCCA 
GCGGCCGCCG CCCTGTGGCT CGGCGCAAGT CCCCACGTGG CCTATCTCTT ACTCCTCTTG 
ATGACCGGGC TCAACCACCT CGACGGCCTC GCCGACGTGG CCGACGCATT GATGGTCAGA 
GACAGGGAGA GGGCACGCGC CGTGTTGGAA GACCCCAGGA GGGGCACTGG CGGCATATTC 
GCAGTGGTGG CCACATACGC AGTCGCCACA GCCTCTACCG CGTCCCCTCT TCAGCTCCTC 
TTGGCAGAGG TCTTCTCAAA GGCACTGATA GTGACCGTAG CGGCGTTTAG CAAGCCATTC 
AAGCCCGGCT TAGGGGCGCT GTTTATAGAC GGCGCGAGGT CCACCTGGCC GCTGGCGCTC 
CCAGCCCTAG CCGTGATAAT ATGCTTAAGG CCAGCCGCTA CGCTTGCCGC CCTTGCCGTT 
GCCTTGGCGT TGTATGCTGT TGCATATCAA CACCTCGGTG GGGCAAACGG AGACGTCTTC 
GGCTACCTTC TAGAGGTCTC ACGTGTGGCG TATATAGTTA CGTGGCACAT GTAG
 
Protein sequence
MQCLRALLSF FTIIPAGVAK LDFKCAWALP YVVPPLVAGP AAAALWLGAS PHVAYLLLLL 
MTGLNHLDGL ADVADALMVR DRERARAVLE DPRRGTGGIF AVVATYAVAT ASTASPLQLL 
LAEVFSKALI VTVAAFSKPF KPGLGALFID GARSTWPLAL PALAVIICLR PAATLAALAV 
ALALYAVAYQ HLGGANGDVF GYLLEVSRVA YIVTWHM