| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1486 |
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| Symbol | |
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| ID | 4909690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1382576 |
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| End bp | 1383535 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640125235 |
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| Product | cytochrome c assembly protein |
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| Protein accession | YP_001056371 |
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| Protein GI | 126460093 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTGT ATTATGTCCA CATGTCTCCC TTGGGTATTC TCCTGGCGGT TTTAATAGTG
GTAGACGTGG CTACCGCGGT TTATTTGGTG AATTGGGGGC CGTTTCCGCT TATTGTGGCT
GAGCTGGGGG CTCCCACGGC GTATTTAAAC GTCTACGTCC ACGTGCCGCC CGCGGTTGTC
CTCTACGTCA TGGCCGCTCT GTCCTTTGTC TTGGCGGTGT GGGGGGCTTG GAGGGGTCTC
TCAGAGCGGG CTCTCAAGTG GATGGACTTC TCGGCCTACT CAGTGGCGGC GCTGGGGTGG
TACGCCTTTG TCAGCGGCAC CGTCTGGGCG GCGGAGAGCT GGGGCACGCC CCTCGCCCTA
GACCCCAGAC AGATGTCTAT CCTAGTGCTC GCGCTGATTT ACTCCCTATA CCCAGCCATT
AGGAGGGGGG TCGAGGACCC CGAGAGGAGC GTAAAGCTTG CCCAGTCTTT TGTTATCGCG
GGCTTTGTCC TCGCAATTGT CTCTCTCCTC GCGCCTGTCT TGGCACAGGC GTTTCACCCC
AGGCCGGGCA CCACCTTCGG GGGGCCCCTG GGGCAGTACA TGGGCATGCG CATCCTCTTG
ATCTTGACCA TCTTCTTGAC CCTCCTCTTT GTTAAGCCGG CGAGGTGGAC CTCAGCCGTG
TATTTAGCCG GCCTCGTTGT GGCAGTGGCT CTCCTCTACC CTTGGCTCCT CTACCAACCC
CAGAGGGTGG TGAATGTGAC TGAGACGTCT ATTGTGTTAG AGAGCGGGCA GGTGCTCAAC
GTGCCGCCTG GGCAAGTGTT AAGCCCCGCC TTTTTCAACG GCACGCCTAC TTTGCCCAAG
AACTTCGTGG CTGTGGCAGG CGGCGGGGTG GAGCTGGTGC GGCACTTCAG CGCGTATGTA
AACGCCGCGC TTTACTTCGC CACAATGGCT TTTATACTCT GGCTCCGGGA GAGGCTATGA
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| Protein sequence | MDVYYVHMSP LGILLAVLIV VDVATAVYLV NWGPFPLIVA ELGAPTAYLN VYVHVPPAVV
LYVMAALSFV LAVWGAWRGL SERALKWMDF SAYSVAALGW YAFVSGTVWA AESWGTPLAL
DPRQMSILVL ALIYSLYPAI RRGVEDPERS VKLAQSFVIA GFVLAIVSLL APVLAQAFHP
RPGTTFGGPL GQYMGMRILL ILTIFLTLLF VKPARWTSAV YLAGLVVAVA LLYPWLLYQP
QRVVNVTETS IVLESGQVLN VPPGQVLSPA FFNGTPTLPK NFVAVAGGGV ELVRHFSAYV
NAALYFATMA FILWLRERL
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