Gene Pcal_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1443 
Symbol 
ID4909737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1350097 
End bp1350447 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content52% 
IMG OID640125193 
ProductDsrE family protein 
Protein accessionYP_001056329 
Protein GI126460051 
COG category[R] General function prediction only 
COG ID[COG2044] Predicted peroxiredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.621621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGATA AAGTGGCCTT CTTAGCCACA ATGCCGCCTG CAGATGGGCC TAGAATTTCT 
ACAATGCTCG GCTACGCCTT GGCAGCCGCC TCTATGGGAT TCGAGGTGTT GATTTTCTAC
ACCTTGGACG CAGCCCACAT AGTAAAAAAG AAAGTCTTTG AAAAACTAGA CCCGCAGATT
AGGGAGAGGT TTAAGCAGTG CATGGACATG GGGTGTAAGA TGTGGCTGTG CTCCTCGGCC
GCGGCCACCT TCAACATAAA AGAGGACGAG GTAGTGGAGG GAGTCAAGAT AATGGGCATA
GCGAGCTTCT ACGAATACGC GGCTGAGGCC AAGGTTGTGC TCACTTGGTG A
 
Protein sequence
MPDKVAFLAT MPPADGPRIS TMLGYALAAA SMGFEVLIFY TLDAAHIVKK KVFEKLDPQI 
RERFKQCMDM GCKMWLCSSA AATFNIKEDE VVEGVKIMGI ASFYEYAAEA KVVLTW