| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1407 |
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| Symbol | |
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| ID | 4909180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1320797 |
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| End bp | 1321969 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640125157 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001056293 |
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| Protein GI | 126460015 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0722893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAG TGCTGGCGGA GACCTACCTA TTTCTAAAGG GGCTCTGGAG GTACCGGGAG
ACTCTCTTCT GGGTGGTAGT ATTCCCCGCA CTCCTCGTCG CAGTGTTCAT ACTGATCTTT
GGGTCGCCCC AGCAGAGCGT CAGCCTAAAC GTGGCGGCGG TGGACTTAGA TGGTGGTCCC
CTCGCCTCCG CCCTCTTGGA GGCCCTCAAC TCCACGGGGG TGGCTAAGGT GCGCCTGGCC
CAGGCGGGCG ACGTGGCGGG GCTTGTGGCC AATGGCACAT ACGACGTAGT GCTGGTGGTG
CCCGCTGGCT TCACTGCGAA CTTGACACAG GCGAGGAGGG CCGTGGCCTA CTTGTACTAC
TACGCCGACC CCAACTGGGG CGGAGTGGCG AGGGGGGTGG TGTATGGGGT AGTGGAGGAG
TTTAGCGCCT CAGTCGCCAA ATACGCCGTC AACTTCACGC CGGCCCCGTT TCGCCCATAC
GTGGAATTTG TGGCGCAGCC CATCGCCCTC CGCGAGGCCC CCGTGGAGCC CAAGCTGGGC
CCAGGCGGGT TAGCGCTCTT CCACGTGGTT AGCGTCATCG GCGTGCAGAC GCTCTTCATA
GGGCTGTTCA CCGGGGTCAA CATCGTGATA GAGCGGCGGC GTGATAGGAC GCTTGCCCTC
CTCCTCTCTA GCCCAATGAG GAGCTACCAC ATATTCCTCG GCGACACGCT CGCCGCGGCG
GTGGCCGTGG GAATCTCGGC CGCGGCTGTG CTGGCGGTGG GGTACGCCCT CGGCGCAGAC
TACGGCGCCA TTTCGCCGGG CCAGGCGGGC GCCGCCGCGC TTCTACTGGC CGCGGGCCTG
CTGTCCACCA TAGGGATAGG CCTCCTCTTG GCGCCCCTAG CCAGGACCCC CGAGGCGGCC
GCCGCCATGG CAAACGGCGT AGCTTTCCCG CTCATGTTCC TGGGAGGGCT CGCCGTCCCC
CAGTGGATGA TACCCGAGTG GCTCCGCATT GTCCCAATGG CTCTGCCGCT CTCGTGGTGC
ATCAACGGGG TGAGGGCCAT GTTCCTATAC GGCTACGGGC CTCTGGAGGC CCTCTCCCAG
GCGGCTCCGG GGGTTGCCGC GGGGCTGGCG CTGTACGCAG TAGGCGCCTT GGTCTACAGG
CGGTTGCTCC ACAGGGCGCA GGAGAGTCCA TAA
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| Protein sequence | MSQVLAETYL FLKGLWRYRE TLFWVVVFPA LLVAVFILIF GSPQQSVSLN VAAVDLDGGP
LASALLEALN STGVAKVRLA QAGDVAGLVA NGTYDVVLVV PAGFTANLTQ ARRAVAYLYY
YADPNWGGVA RGVVYGVVEE FSASVAKYAV NFTPAPFRPY VEFVAQPIAL REAPVEPKLG
PGGLALFHVV SVIGVQTLFI GLFTGVNIVI ERRRDRTLAL LLSSPMRSYH IFLGDTLAAA
VAVGISAAAV LAVGYALGAD YGAISPGQAG AAALLLAAGL LSTIGIGLLL APLARTPEAA
AAMANGVAFP LMFLGGLAVP QWMIPEWLRI VPMALPLSWC INGVRAMFLY GYGPLEALSQ
AAPGVAAGLA LYAVGALVYR RLLHRAQESP
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