| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1406 |
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| Symbol | |
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| ID | 4909119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1319901 |
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| End bp | 1320776 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640125156 |
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| Product | lipoyl synthase |
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| Protein accession | YP_001056292 |
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| Protein GI | 126460014 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0320] Lipoate synthase |
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| TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0645546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTTGC CTAGCTGGAT TAGGGTTAAG GCGGGCGACT ACGGGAGGAT CGTCGCGGTG
AGAGAGGCCG TCTTCGCGGC GGGGGTTCAC ACCATCTGCG AGGAGGCGCA CTGCCCCAAC
ATATTTTCCT GCTGGGGGGA GGGCACTGCG ACCTTTCTCA TCCTGGGCGA CGTGTGTACT
AGGGCGTGCA AATTCTGCGC AGTTAAGACG GGTGACCCCA GGGGCTTCGT AGACCCGACT
GAGCCGGCGA GGGTGGCGGA AGCCGTGGCG AAGCTCGGCC TTAGGTACGT GGTGATAACC
TCGGTGGATA GAGATGACCT CCCCGACGGA GGCGCCTCCC AGTTCGCCAG TGTGGTCAAG
GCGGTCAAGG CCAGGGCCCC CTGGGCCAAG GTGGAGGTGT TGACCCCGGA CTTTGGGGGG
AGTGCGGAGG CTGTGGCGTC TGTGGTAGAG GCGGGGCCCG ACGTCTATGC CCACAACTTG
GAGACTGTGC GCCGCTTGAC TCCGCTTGTT AGAGACAGGA GGGCCTCCTA CGACGTCTCG
CTTCGCGTGT TGAAGATGGC GAAGGAGCTG GGCGCGGTCA CCAAGTCTGG CCTAATGGTG
GGGCTTGGGG AGACCTTTGA CGAGGTGTTA GAGGCCTTGA GCGACTTGAG GCGGGTGGAC
GTGGACATAG TCACCATTGG CCAGTACCTC AAGCCCCGGG GGCACAAGAG GTTTCTAGAG
GTGCAGAGGT GGGTGCCGCC TGAGGAGTTT GAGAAATATA GGGAGGCAGC CGAGGCCATG
GGGTTTAAGG CCGTGGTGGC TGGGCCGCTT GTCAGAAGCT CCTACAAGGC TCACGAGGCC
TATTTAGAGA TGTTGAGAAA AACTATAGGA CGATAA
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| Protein sequence | MELPSWIRVK AGDYGRIVAV REAVFAAGVH TICEEAHCPN IFSCWGEGTA TFLILGDVCT
RACKFCAVKT GDPRGFVDPT EPARVAEAVA KLGLRYVVIT SVDRDDLPDG GASQFASVVK
AVKARAPWAK VEVLTPDFGG SAEAVASVVE AGPDVYAHNL ETVRRLTPLV RDRRASYDVS
LRVLKMAKEL GAVTKSGLMV GLGETFDEVL EALSDLRRVD VDIVTIGQYL KPRGHKRFLE
VQRWVPPEEF EKYREAAEAM GFKAVVAGPL VRSSYKAHEA YLEMLRKTIG R
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