| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1386 |
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| Symbol | |
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| ID | 4909245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1298699 |
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| End bp | 1300579 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640125136 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001056272 |
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| Protein GI | 126459994 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.911526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAAAG AGTTCCTCGA GCTCTACCAA GAGTCGTTGA AGGACCCGAT TGGGTTCTGG
GAGAGGCAGG CCGCTAAGCT GTACTGGAGG GCCAAGTGGG AGAAGACGTA CGACGACTCC
AACCCGCCGT TTTACAAGTG GTTTGTGGGC GGGGAGACCA ACATCACGTA CAACGCCCTT
GACCGCCACG TGAGAGAGGG GAGGGCGAAC AAGGCCGCCC TCATCTGGGT CTCCTCCAGC
GGCCAGACCA GGGTGCTGAG GTACTGGGAC CTCTACCGCG AGGTAAACCG CTTTGCCACT
CTGCTTAGGA TGAGGGGCGT GGAGCGTGGG GACAGAGTCG TGATTTACAT GCCCATGATT
CCGGAGGCCA TGGTGGCCAT GCTAGCCGTA AGTAGAATAG GCGCTGTGCA CACGGTGGTG
TTCTCGGGCT TTGGGGCCCA GGCGCTGGCG GATAGGATAA GAGACGCCGA GGCCAAGCTC
GTCATCACCG CCGACGGCAT GACTAGGCGC GGTAAAGTGA TTCCGCTTAA GCCCACGGTG
GACGAGGCCT TGGCCATCGC GGGGCTAGAC GCCGAGGTGG TGGTGTATAG GCACGTGGGC
GTCGGCGTGC CGATGAGGGA GGGGAGGGAC TTCTGGTGGC AGGAGGAGAT GAAGTCTATT
CCGCTCAACG CCTACACTGA GCCTGAGTGG GTGGCCGGCG ACGAGCCCCT CTTTATACTC
TACACCTCGG GCACCACGGG GAAGCCCAAG GGCATTCTCC ACCTCCACGG GGCCTACATG
GTGTGGGTGT GGTACGCCTT CAGCCACCTG GTGGGGGCCG AGAGGGAGTT TAGAGACGAC
ATCGTCTTCT TCTCCACCGC CGACATTGGG TGGATCTCGG GCCACCACTA CGGCGTACAC
GGCCCGCTCC TCAACGGGCT GACGGTGCTC TGGTACGACG ACGCGCCGGA CTACCCGCAC
CCGGGCATCT GGTGGGAGAT AGTGGACGCC TACAAGGTGA CTCACATCCT CTTCTCCCCC
ACCGCCATCC GCCTCTTGAT GAAATACGGA GACGAGTGGC CGCGGAGGTA CAGCTTGGAC
ACCCTAATGG CGGCTTATCC CACTGGCGAG GTCCTCAACG AGGAGGCGTA CAAGTGGCTT
GTGACCAACG TGTGCAAGAG GGGGTGCCAA GTGGCGGACA TCTGGGGGCA GACCGAGACC
GCGTGCTTCG TCACAGCGCC CGGCTCCATG AACCTCGGGG GGTTCAGCTA CAAGTACGGC
TCTGTCGGCC TTCCCTACCC CACTCTCAAC CTGGTGATTC TAGACGACGA GGGGAGAGAG
TTGCCGAGGG GGCAGAAGGG CCACGTGGCG GTCAAGCCCC CGTTGCCCCC GGCCTTCTTG
CACACCCTGT GGAGAGACCC CAAGCGCTAC GTGGAGAGCT ACTGGTCTAA GTTCAAGGGG
TACTACCACA CAGGCGACCT CGGCTACATA GACGAGGACG GCCACCTCCA CATCCTAGGC
CGCTCCGACG ACGTGATCAA GGTGGCGGGG CACCGCCTCT CCACTAGGGA GGTGGAGGAC
ATAGTGGCAT CGCACCCCGC CGTGGCGGAG GCTGCGGTGG TGAGCATACC TGACCCAGTG
AGGGGGGACG TGCTCGCCGT GTTTGTAGTG CCCAGGGCCG GGAGGCTGAT AACCGAGGAG
GAGGTGGTGG CGCACCTCAG GAAGAGCCTC GGCCCACTGG CCGTGGTGGG CAAGGTGGCC
ATTGTGGAGA AGTTGCCTAA GACTAGGACT GGGAAAGTCA TGAGGAGGGT GCTCAGGGCC
ATGGCCATGG GGCAGCCGCT GGGCGACTTG AGCACGCTGG AGGACGCAGA GGCGATAGAA
CAGCTAAAGG AGAAGTTGTA G
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| Protein sequence | MSKEFLELYQ ESLKDPIGFW ERQAAKLYWR AKWEKTYDDS NPPFYKWFVG GETNITYNAL
DRHVREGRAN KAALIWVSSS GQTRVLRYWD LYREVNRFAT LLRMRGVERG DRVVIYMPMI
PEAMVAMLAV SRIGAVHTVV FSGFGAQALA DRIRDAEAKL VITADGMTRR GKVIPLKPTV
DEALAIAGLD AEVVVYRHVG VGVPMREGRD FWWQEEMKSI PLNAYTEPEW VAGDEPLFIL
YTSGTTGKPK GILHLHGAYM VWVWYAFSHL VGAEREFRDD IVFFSTADIG WISGHHYGVH
GPLLNGLTVL WYDDAPDYPH PGIWWEIVDA YKVTHILFSP TAIRLLMKYG DEWPRRYSLD
TLMAAYPTGE VLNEEAYKWL VTNVCKRGCQ VADIWGQTET ACFVTAPGSM NLGGFSYKYG
SVGLPYPTLN LVILDDEGRE LPRGQKGHVA VKPPLPPAFL HTLWRDPKRY VESYWSKFKG
YYHTGDLGYI DEDGHLHILG RSDDVIKVAG HRLSTREVED IVASHPAVAE AAVVSIPDPV
RGDVLAVFVV PRAGRLITEE EVVAHLRKSL GPLAVVGKVA IVEKLPKTRT GKVMRRVLRA
MAMGQPLGDL STLEDAEAIE QLKEKL
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