Gene Pcal_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1370 
Symbol 
ID4908424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand- 
Start bp1287124 
End bp1287723 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content59% 
IMG OID640125121 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001056257 
Protein GI126459979 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR02694] arsenite oxidase, small subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.571806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGG GTGAAAAGAA AGAGGGGGTA AAGCGCCCCG ACTCCACTAG ACGCACTGTC 
GTGGCGGCGG CCGGGGCCTT GGTAGTTGGA GGCGTGGTGG GCTACCTGCT GGCGCCCCGA 
GGCGCCGTGG AGACAGTTAC CCAGACCGTC ACGCAGACGG TTACGCAGAC CCAGACGGTC 
ACTCAGCAGG TCCCCCAGCC GGTGCCCCAA GCCAAGGCCT ATGAGCGGGT TAGGCTGGCG 
AATATTAGGG ATTTGGCCAA TAAGAGGCCG GTGGTGAGGC AGTACATGGG TCTGAACGTG 
CTTCTAGTTA AGCTGGGTGA GCGTGCTGTT GGGGGCGTTG GGCCCGACGG AGATGTTGTG 
GCCTTTGTAA ATGTTTGCAC TCACATGGGT GGGCCGTTGA TTTATGTCCC CGACACCAAC 
TGTGCCGTCT GCCAGCTCCA CTATACTCAG TTCGATTTGG CTAGGGGCGG GAAGCAGGTC 
ACGGGGCACG CCACCGAGTA TCTGCCCCAG GTGGAGCTCG AATACGACGA GAAGACGGGC 
GATATATATG CCGTTAGTAT TAACCAGCTT GTCTACGGGA AGTACGACAA CTTGGCGTAG
 
Protein sequence
MSEGEKKEGV KRPDSTRRTV VAAAGALVVG GVVGYLLAPR GAVETVTQTV TQTVTQTQTV 
TQQVPQPVPQ AKAYERVRLA NIRDLANKRP VVRQYMGLNV LLVKLGERAV GGVGPDGDVV 
AFVNVCTHMG GPLIYVPDTN CAVCQLHYTQ FDLARGGKQV TGHATEYLPQ VELEYDEKTG 
DIYAVSINQL VYGKYDNLA