| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1345 |
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| Symbol | |
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| ID | 4910254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1262505 |
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| End bp | 1263290 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640125097 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001056233 |
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| Protein GI | 126459955 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.24164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGCTGT TCTTCGAGCT TTATAGGCAG AGCGGCCTCG CGTTTAGCTA CAGGCGCTAC
TTGGCCGCGC TGGTCCTTAT CCCTCTGGCC TCCGGCGCGG CGGGGGGCGT GGCGGCCCTC
TTCCTCCTGG GCCCAGTCGC CGCCTTGGCG GTGGGGCTCA TGGCCGGGCT CTTGGCCTTC
GCGGGGGTTG TGGCGTATCC GCTCCACCTC GTCTCGGCTA GGCGGTCGCA CTTTGAGAAC
AACTTTGTCT ACACCCTGGC CGTGATGCTC CCGCTCTTCG CCGCGGGGGT GCCCCTTGGG
AGAGTGATAG CTAGGCTGGC CGAGGTGGAG GCGGACAAGT ACATCGCCAG GGAGTTCGCC
CTGGTGACGA GGGAGGTGGT GGTGATGGGG GCCACTCCCA CGGAGGCCCT CCTACACAGC
GCAGAGAGGG TGCCCAGCCA GGCGTATAGG GAGACGGTGA ACCTCTTGGC CAAGGCCTCC
CGGGTCACGG AGCGCGTGGA CGAGGTGTTG TTGGCCAGGC TGGAGTGGAT GCTCAGGGGG
AAGCAGGTGA AGGCCCAGTC CCTCGTGCGG TCGCTGGCCC TCCTCTTTGA GATATACGTC
GTCGCGGCGA TGCTCTTGCC CATATTGGTG GCCATACTCG CCCTAGCCCT CAGCCCACTA
GGCGCCCTAG AAGTGGCTGG CTTCGCACTA GACCCAGTGA CTCTAATCGC CCTCACGGGG
CTAATATACA GCCCACTAGT TGGAGCTGTC TTCTACATCA TCTTTGATTC AAATGCAAAT
ATATAG
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| Protein sequence | MRLFFELYRQ SGLAFSYRRY LAALVLIPLA SGAAGGVAAL FLLGPVAALA VGLMAGLLAF
AGVVAYPLHL VSARRSHFEN NFVYTLAVML PLFAAGVPLG RVIARLAEVE ADKYIAREFA
LVTREVVVMG ATPTEALLHS AERVPSQAYR ETVNLLAKAS RVTERVDEVL LARLEWMLRG
KQVKAQSLVR SLALLFEIYV VAAMLLPILV AILALALSPL GALEVAGFAL DPVTLIALTG
LIYSPLVGAV FYIIFDSNAN I
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