| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1276 |
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| Symbol | |
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| ID | 4908592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1184310 |
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| End bp | 1184585 |
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| Gene Length | 276 bp |
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| Protein Length | 91 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640125029 |
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| Product | CRISPR-associated Cas2 family protein |
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| Protein accession | YP_001056166 |
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| Protein GI | 126459888 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0297999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACATAG TGGTGGCATA CGACGTGTCG GAAGACCACG TGCGCAACAA GGTAGCCGAG
ACCCTAGCCG CCTACGGCCT CCAGAGAATA CAGCGCTCAG TTTTCGCAGG CCGCCTACCC
CCAGCCCTGG TGAAGGAGCT TGCGGAGAAG CTACGCCGAG TCACAAGAGG GGCAAACGCC
GACGTGATAA TCATAAGAGT AGACAAGAGG GCCCTAGACA CCGCCGTGAG GATAGGCCCC
GCTCTGCCAA GGGAGGGCAA TGTCCACCTG CATTAA
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| Protein sequence | MYIVVAYDVS EDHVRNKVAE TLAAYGLQRI QRSVFAGRLP PALVKELAEK LRRVTRGANA
DVIIIRVDKR ALDTAVRIGP ALPREGNVHL H
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