Gene Pcal_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1256 
Symbol 
ID4909528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1167583 
End bp1168386 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content64% 
IMG OID640125009 
Productchromosome partitioning ATPase, ParA family protein 
Protein accessionYP_001056146 
Protein GI126459868 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.531802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGTTT TTGCCTTTCT CTCCGCGGGG GGCGGGGTGG GCAAGACCAC CATGGCTCTG 
CACTTGGCGC ACCGCTTCCT GCTCGAGGGG CGGCGGGTCC TCCTCGTGGA CTTGGACCCG
AGCGCGGGCT TGTCCACCGC CCTCCTGGGG GAAGAGGGGG CGGCCAGGGC CGAGGAGTCC
GGCCTGACCG TGGGGCACCT CCTGTGGAGG CTTTTGAAGG GGGCGCCCGT GGACTGGGCG
GGGTATGTGG CCAGGCCGCG GCTGGGGGGC CTCGAGGTGG ACCTCTTGGT GGGGGGCGAG
GAGCTCAGCG ACGTCATGGG CTCCATATGG TTCTCCGCCA CGTGGCCCAG CCCGGAATCC
GTGCTTGGGC GCCTGCTGGG CCCCGTCTTC GCCGCGTATG AAGTAGTCAT CCTCGACACT
ATCCCCTTCT ACGAGCGGCG GTACTCCATG TCTGCGTTTT TCGCCGCGGA GAAGGTGGTC
GTCGTGGCGC ATCCCTACGG CGCAGAGCCG GCTAGGCTTA GGAGGATGTT CGCCAAATTT
GCCCAAGTCC TGCAAACCAC GCCTCTGGAC ATGAAGACGC GCCTCTTGGT AAACAAGGTG
GGCAACGACA GAGAGGGCAA GGCGTGGAGA GAGAGACTCG CCCAGGCGGC TATCCCAGTG
TTTAAGACAG TGATTGGGGA CAGAGTGGCC TACTCCCGCG TCCCCGAGAT GGCCTACGTC
AAAGACAGAA AGGCTAGGGG TGAGGTGGAG TCCTGGTTTA GAGAGGTCGT GGAGTGGGCC
GCCACAGAGG TGGAAGTGTT TTAA
 
Protein sequence
MTVFAFLSAG GGVGKTTMAL HLAHRFLLEG RRVLLVDLDP SAGLSTALLG EEGAARAEES 
GLTVGHLLWR LLKGAPVDWA GYVARPRLGG LEVDLLVGGE ELSDVMGSIW FSATWPSPES
VLGRLLGPVF AAYEVVILDT IPFYERRYSM SAFFAAEKVV VVAHPYGAEP ARLRRMFAKF
AQVLQTTPLD MKTRLLVNKV GNDREGKAWR ERLAQAAIPV FKTVIGDRVA YSRVPEMAYV
KDRKARGEVE SWFREVVEWA ATEVEVF