Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1233 |
Symbol | |
ID | 4909400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 1148242 |
End bp | 1149567 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640124987 |
Product | glycerate 2-kinase |
Protein accession | YP_001056124 |
Protein GI | 126459846 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2379] Putative glycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.273528 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTAAAA ACAGAGAGGA GTTGGCAAGG GACTGGCGCC ATGCCCTCCT CCTAGACGCC TTAGAGGAGG CACTGGCGGC GGCCGACCCC CGCCGAGCAG TCCTCAGCGT CGTCAAGAGG CGGGGAGATG TGGCTGAGGT GGCGGGGGTG GAGTTGCGGG GGAGGGTACA CGTGGTTGGC TTTGGGAAGG CGTCGAGGGC CATGGCGGAG GCCCTCGTGG AGGCGCTGGG GGACTTAGTG GCCGGGGGCG TGGTCATAGA CCCCGCCGTG GAGGGGCGGA TAGGCCCCGT AAGAGTGGTA AGGGGGGACC ACCCAACGCC CGGGCCCAAC ACCGCGAGGG CTTCCCAGGA GCTGTTGGAT TACCTAGCCT CGGTGGGCCG CGAGGATTCG CTGGTGGTGC TGGTGTCTGG CGGGGGCTCG TCGCTCTTCG AAGTGCCGGA GGACGGCGTG TCGCTTGACG ACATTAGCCG CTTGACGCAG GAGCTCATGC GCCGGGGGGC CGACATAGTG GAGCTCAACG CCGTGAGAAA GCGCCTCTCC CGGGTCAAGG GCGGCAAGCT CCTCAAGCTC ATAAAGGCGC AGAGGGTGGT GTCCCTCATC ATAAGCGACG TGGTGGGCGA CAGGCTAGAC GTCATTGCGT CGGGCCCCAC CGCGCCCGAC GAGTCGACCC GCGAAGACGC AATACGCGTC CTCAAGAAGT ACGGCCTCTG GGACGGGCTC CCGCCGGGCG TTAGGCGGGC GGTGGAGAGC GGGGCGAACA CGGTGAGGCG GGACGACCCG CTCCTGGAGA AGGTAGTCAA CGTGGTAGTG GCCAGCAACG TCCAGTCCCT ACGCCGCGCC GCACAATTCC TCTCCGCCAA GGGGTTCAAC GCCGTGATTG TGACCGCCAT GCTCGAGGGC GAGGCGAGGG AGGCGGGGCG CGTCTTGGCC TCTGTGGCTA AGAGCGCCTC GGCCCACGCC CTTCCTGCGC CAAAGCCAGC AGCCGTGCTC GCCGGGGGAG AGACCGTGGT GACTGTGAGG GGCAACGGGG TGGGCGGGAG AAGCCAAGAG CTCTGCCTCT CTTTCGCAAT GGCGGTGCGG GGGAGCCGCG ACGTAGTTGC CGCGTGCATG GGCACCGACG GGGTAGATGG AAACAGCCCA GCGGCAGGCG CAGTGGTGGA CGGGTTGACG GCGGAGGAGG CGGAGAAGGC CGGCCTCGAC CCCTACGCGC ACCTCGCCAA CAACGACAGC TACACCTTCT TCAAGGCGCT AGGGAGGGCA ATATACACCG GCTACACTGG GACCAACGTA AACGACATCT TCATCGCCCT GGTGGCAGAC TTATAA
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Protein sequence | MIKNREELAR DWRHALLLDA LEEALAAADP RRAVLSVVKR RGDVAEVAGV ELRGRVHVVG FGKASRAMAE ALVEALGDLV AGGVVIDPAV EGRIGPVRVV RGDHPTPGPN TARASQELLD YLASVGREDS LVVLVSGGGS SLFEVPEDGV SLDDISRLTQ ELMRRGADIV ELNAVRKRLS RVKGGKLLKL IKAQRVVSLI ISDVVGDRLD VIASGPTAPD ESTREDAIRV LKKYGLWDGL PPGVRRAVES GANTVRRDDP LLEKVVNVVV ASNVQSLRRA AQFLSAKGFN AVIVTAMLEG EAREAGRVLA SVAKSASAHA LPAPKPAAVL AGGETVVTVR GNGVGGRSQE LCLSFAMAVR GSRDVVAACM GTDGVDGNSP AAGAVVDGLT AEEAEKAGLD PYAHLANNDS YTFFKALGRA IYTGYTGTNV NDIFIALVAD L
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