Gene Pcal_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1233 
Symbol 
ID4909400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1148242 
End bp1149567 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content66% 
IMG OID640124987 
Productglycerate 2-kinase 
Protein accessionYP_001056124 
Protein GI126459846 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2379] Putative glycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.273528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTAAAA ACAGAGAGGA GTTGGCAAGG GACTGGCGCC ATGCCCTCCT CCTAGACGCC 
TTAGAGGAGG CACTGGCGGC GGCCGACCCC CGCCGAGCAG TCCTCAGCGT CGTCAAGAGG
CGGGGAGATG TGGCTGAGGT GGCGGGGGTG GAGTTGCGGG GGAGGGTACA CGTGGTTGGC
TTTGGGAAGG CGTCGAGGGC CATGGCGGAG GCCCTCGTGG AGGCGCTGGG GGACTTAGTG
GCCGGGGGCG TGGTCATAGA CCCCGCCGTG GAGGGGCGGA TAGGCCCCGT AAGAGTGGTA
AGGGGGGACC ACCCAACGCC CGGGCCCAAC ACCGCGAGGG CTTCCCAGGA GCTGTTGGAT
TACCTAGCCT CGGTGGGCCG CGAGGATTCG CTGGTGGTGC TGGTGTCTGG CGGGGGCTCG
TCGCTCTTCG AAGTGCCGGA GGACGGCGTG TCGCTTGACG ACATTAGCCG CTTGACGCAG
GAGCTCATGC GCCGGGGGGC CGACATAGTG GAGCTCAACG CCGTGAGAAA GCGCCTCTCC
CGGGTCAAGG GCGGCAAGCT CCTCAAGCTC ATAAAGGCGC AGAGGGTGGT GTCCCTCATC
ATAAGCGACG TGGTGGGCGA CAGGCTAGAC GTCATTGCGT CGGGCCCCAC CGCGCCCGAC
GAGTCGACCC GCGAAGACGC AATACGCGTC CTCAAGAAGT ACGGCCTCTG GGACGGGCTC
CCGCCGGGCG TTAGGCGGGC GGTGGAGAGC GGGGCGAACA CGGTGAGGCG GGACGACCCG
CTCCTGGAGA AGGTAGTCAA CGTGGTAGTG GCCAGCAACG TCCAGTCCCT ACGCCGCGCC
GCACAATTCC TCTCCGCCAA GGGGTTCAAC GCCGTGATTG TGACCGCCAT GCTCGAGGGC
GAGGCGAGGG AGGCGGGGCG CGTCTTGGCC TCTGTGGCTA AGAGCGCCTC GGCCCACGCC
CTTCCTGCGC CAAAGCCAGC AGCCGTGCTC GCCGGGGGAG AGACCGTGGT GACTGTGAGG
GGCAACGGGG TGGGCGGGAG AAGCCAAGAG CTCTGCCTCT CTTTCGCAAT GGCGGTGCGG
GGGAGCCGCG ACGTAGTTGC CGCGTGCATG GGCACCGACG GGGTAGATGG AAACAGCCCA
GCGGCAGGCG CAGTGGTGGA CGGGTTGACG GCGGAGGAGG CGGAGAAGGC CGGCCTCGAC
CCCTACGCGC ACCTCGCCAA CAACGACAGC TACACCTTCT TCAAGGCGCT AGGGAGGGCA
ATATACACCG GCTACACTGG GACCAACGTA AACGACATCT TCATCGCCCT GGTGGCAGAC
TTATAA
 
Protein sequence
MIKNREELAR DWRHALLLDA LEEALAAADP RRAVLSVVKR RGDVAEVAGV ELRGRVHVVG 
FGKASRAMAE ALVEALGDLV AGGVVIDPAV EGRIGPVRVV RGDHPTPGPN TARASQELLD
YLASVGREDS LVVLVSGGGS SLFEVPEDGV SLDDISRLTQ ELMRRGADIV ELNAVRKRLS
RVKGGKLLKL IKAQRVVSLI ISDVVGDRLD VIASGPTAPD ESTREDAIRV LKKYGLWDGL
PPGVRRAVES GANTVRRDDP LLEKVVNVVV ASNVQSLRRA AQFLSAKGFN AVIVTAMLEG
EAREAGRVLA SVAKSASAHA LPAPKPAAVL AGGETVVTVR GNGVGGRSQE LCLSFAMAVR
GSRDVVAACM GTDGVDGNSP AAGAVVDGLT AEEAEKAGLD PYAHLANNDS YTFFKALGRA
IYTGYTGTNV NDIFIALVAD L