| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1225 |
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| Symbol | |
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| ID | 4909906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1139628 |
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| End bp | 1140767 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640124979 |
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| Product | hypothetical protein |
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| Protein accession | YP_001056116 |
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| Protein GI | 126459838 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain |
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| TIGRFAM ID | [TIGR00273] iron-sulfur cluster-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.229478 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTGGC AGGAGGCTGT AGAGAGGGCG AGGGCGCACA TTGTGCCTAG GACGTACGAG
GTGTTGCAGA GGTTTGAATA CGTCAGAGAG TTGGCCAAGG AGGTGAGGAA GGCGCGGGAG
GAGGTGGTCA AGAACTTGGA CTACTACATT GAGGAGGCGA GGAGGGCCGT GGAGCGGATA
GGCGGGCGCT TCTACCTAGC CGCCACGGGG GAGGAGGCCG TTGAGACTGT GGCAAAGATC
GTGGGGAGGG GCAAGGTGGT GGTAATGAGC AAGAACAACG TGGCCACGGA GACTGGGCTT
AGGCAGAGGC TTGAGGCGGC GGGCAACGAG GTGTGGGAGA CGGACTTGGG CGAGTTCTTG
ATACAGCTGG CCGGGGATGA GCCGAGCCAC ATACTCGCCC CCGCAGTCCA CATGACCAAG
GAGAGGGCGG CCGAGGTGCT TAGGCAGAGG CTTGGAATCG CCGTTCCCCC AGAGGCGGAG
GCCATTGCGC AGAGGGCGAG GGAGTTTTTG AGGGAGAAGT TCCTAAGGGC AGACGTGGGG
ATCACAGGTG CAAACGCCAT AGCCGCAGAC ACGGGGGCGG TGGTGCTCGT GGAAAACGAG
GGCAACATTA GGATGACCAC AGTGTTGCCG CCGGTCCACA TAGTCTACGA CGGCGTGGAG
AAGGTAGTCC CCACGCTACA CCACGCCTTC ATGTCCGCCA TGGTGCAGTC CGCCTACGCT
GGCCTCTACC CGCCCACCTA CGTAAACCTC TCCGCGGGCC CGAGCTCCAC GGCTGACGTG
GAAATGCGCC GGGTGTCCCC CGCCCAGGGG CCGCGTGAAT TCCACGTGGT GCTTGTAGAC
AACGGGAGGA GGAAGGCCGC CAAAGACCCA GACCTATGGG AGGCGCTCCT CTGCATAAGG
TGCGGCCGCT GCCACCTCCA CTGCCCAGTC TACCTGACGC TGGGCAGAGA GTTTGGGAGG
CCCCCCTACA CGGGGCCCAT GGGCGTGATG TGGACAGCGG TTACGCGGGG CATAGAGGAG
GCCGGCCCAC ACGCGCTTAA GTGCGTACAC GCGGGGAACT GCAGAGAGGT GTGCCCAATG
TCAATAGACA TCCCCAAGGT GATACACGCA ATAAGGGCCA GATATCTAAG GGCGCGTTAG
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| Protein sequence | MSWQEAVERA RAHIVPRTYE VLQRFEYVRE LAKEVRKARE EVVKNLDYYI EEARRAVERI
GGRFYLAATG EEAVETVAKI VGRGKVVVMS KNNVATETGL RQRLEAAGNE VWETDLGEFL
IQLAGDEPSH ILAPAVHMTK ERAAEVLRQR LGIAVPPEAE AIAQRAREFL REKFLRADVG
ITGANAIAAD TGAVVLVENE GNIRMTTVLP PVHIVYDGVE KVVPTLHHAF MSAMVQSAYA
GLYPPTYVNL SAGPSSTADV EMRRVSPAQG PREFHVVLVD NGRRKAAKDP DLWEALLCIR
CGRCHLHCPV YLTLGREFGR PPYTGPMGVM WTAVTRGIEE AGPHALKCVH AGNCREVCPM
SIDIPKVIHA IRARYLRAR
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