| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1219 |
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| Symbol | |
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| ID | 4909051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1131185 |
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| End bp | 1132585 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640124973 |
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| Product | FAD linked oxidase domain-containing protein |
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| Protein accession | YP_001056110 |
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| Protein GI | 126459832 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.253497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCTTA GCTTTATAAA GAGGCTGGAG GAGGTTGTGG GGAGAGGAGG CGTCTTATAT
CGTGAGGTCG ATTTGTTGGT GTACGAATCA GACGGAACCC TGGCGCTTAG GGGGCGGGCA
GACGCCGTGG TGTTTCCACG TAGCGTGGAG GAGATGGCCA AGGTGGTGGA GCTGGCGTAC
AGCCATGGGG TCCCCATCGT GGGCCGCGGC TCTGGGACGA GTCTAAGCGG CGGAGCCGTG
GCGGCAAAGG GCGGCATCGT GATAAGCACG GCGCGTATGA ACAAGATCAT AGAGGTGGAC
TTGGCCAACG AGGTGGCTGT CGTGCAAGCC GGCGTGATAA ACGACTGGAT AAACGCCTAC
CTCTCCCGCC TGGGCTACCA ATACCCAGTA GACCTCGGCT ACCAGTACAT GGCCGACCCG
GGGTCCCAGA GGGTGTCCAC CATAGGGGGC AACATAGCCC ACAACTCCGG AGGCGTCAAG
TGTTTTAAAT ACGGCGTAAC TGTGAACCAG CTGAGGGGCC TCACCGTCGT TATCCCGCCG
GGCGAGGTGA GGAGAATCGG CGGCAAAGAG TTCGAGCAGC CTGGATACGA CCTAATAGGC
CTAGTGGCGG GCTCCGAGGG CACTCTGGCC CTAGTGGCAG AGGCCGTGGT GAGGATAACC
CCCCTCTACG AGGCCACGCT CACAATACTG GCATCGTTCA AAGACCTCTA CACCGCGGGC
AGAGCAGTTT CCGCCGTCAT AGCCTCAGGC GCCATGCCAG TGGCGATGGA GCTCATGGAC
AAGCTCGCCG TGGAGGCGGT GGAGTCTGGG CCATACGCCG CCGGGCTCCC CAGAGACGCC
GAGGCCGTCC TCCTCATACA GGTAGAAGGC TCGCCCCCAG GCGCGGCGGC TGAGGCGGAC
AAGGTGGCCA AAGTCCTCAG AGAGGCCGGG GCCGCCCAAG TAGAAATCGT AGACGACCCC
AACAAGGCGG CGCGGCTTTG GGCCGCGCGT AAGCAGGCGT TCGGCGCCAT GGGATTTGTG
GGGCCTAACT ACGTCGTGGA AGACGGCACT ATTCCCAGGA AGCGCCTGGC CGAGGCCTTG
GCCATTGCCA GAAGCGCCGC GGCGAAGAGG GGCCTCCGCG TGGCCAACGT GTTCCACGCC
GGCGACGGGA ACTTGCACCC CCTCATCCTC TACGACGAGA GAAAGCCCGG GGAGAGGGAG
AAGGCGATAG AGGCGGGAGA AGAGATCTTA GAGGCATGCG TAGAGCTCGG CGGCACCATC
ACCGGGGAGC ACGGCGTGGG CTACATGAAA AAGAGACTTT TGGCGAAGAT GTACGGCGAG
GCTGAGATAG GCATCATGAA GGCCATAAAG GCGTCCTTTG ACCCAAAGGG CCTCCTAAAC
CCGGGCAAGA TATTCCCATG A
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| Protein sequence | MDLSFIKRLE EVVGRGGVLY REVDLLVYES DGTLALRGRA DAVVFPRSVE EMAKVVELAY
SHGVPIVGRG SGTSLSGGAV AAKGGIVIST ARMNKIIEVD LANEVAVVQA GVINDWINAY
LSRLGYQYPV DLGYQYMADP GSQRVSTIGG NIAHNSGGVK CFKYGVTVNQ LRGLTVVIPP
GEVRRIGGKE FEQPGYDLIG LVAGSEGTLA LVAEAVVRIT PLYEATLTIL ASFKDLYTAG
RAVSAVIASG AMPVAMELMD KLAVEAVESG PYAAGLPRDA EAVLLIQVEG SPPGAAAEAD
KVAKVLREAG AAQVEIVDDP NKAARLWAAR KQAFGAMGFV GPNYVVEDGT IPRKRLAEAL
AIARSAAAKR GLRVANVFHA GDGNLHPLIL YDERKPGERE KAIEAGEEIL EACVELGGTI
TGEHGVGYMK KRLLAKMYGE AEIGIMKAIK ASFDPKGLLN PGKIFP
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