| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1218 |
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| Symbol | |
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| ID | 4908970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1129750 |
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| End bp | 1131129 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640124972 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001056109 |
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| Protein GI | 126459831 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.126546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGACCG TTCTCAAAGA ACTTGAGTCA ATTTTCGGGG ATCGGTTATA TACAGAGCCG
CAGATACTGG CTCTTTATAG TAGAGAGGCC TCTTCTGAGT CTGGCCGTCT TCCCCTGGCT
GTGGTTTATC CAGCAAATCC AGATGAGGTG GTTGAGCTGG TGAAAACTGC TATTAAAAAC
AGGCTTAAGA TTGTACCTCT AGCCTCTTCC ACTAGCCTTT CTGGAAATAC TGTAACAAAG
GAAGAGGGAG TGGTAGCTGT TTCTTTTGAA AAAATGGTAA AAGTTTTAGA AATCTCCGAC
GTGGATTGGT ATGCACGGGT GCAACCTGGC ATTAGGGTGG ATGAGCTTAA CTTGGAACTC
TCTAAGTATG GGCTTCAGTG GCCTGTTGAC CCCGCATCCG CAAGGGCGGC GTCGGTGGGG
GGCGTCATAG CAAATGGCGG CGGAGGAGTC AAGGGGGCTA GATACGGCCC GGCTTCTCAT
TGGGTACTAG CTCTTGAGGC AGTCATAGGC ACTGGGGATG TGATCAGGGT GGGCTGTTCC
ACTGTGAAAT GCCGCGAGGG GTACAACCTT ATGCAACTTT TCATCGGCAG TGAGGGGACG
TTGGGCATTG TCACTGAGGC AACTCTTAGA CTGGCGCCGT TGCCGCAGTC TTTTGTAGGA
GTTATGTCGC GGTTCCAAGA CGTAATGCCG CTAGTAGACG CGGTGATAGA GGTGAGGAGG
TCGAGGATCT GGCCCACGGT GGCCGAGTTC GTGGATAGAG AGGTGGCCAA GCTGGTGGGC
CTCGGGGAGG GGTACTACCT GTGGCTTGGC TGTGAAGTGA CGCCGGGGGG CGAGAAAAAC
ATGTTAAATG CTCTCAGCAA CGTGCTGTCC AGCAGGGGTG AAATTATCGC AGTGGCGTCG
TCTCTTGGCG AATTTAATAA GCTGTTAGAA CCGAGGAGGA GACTTTACAG TGCTCAGCTT
AATGCGGCGT TTGAAGACTA TGGCACCGAC GCCTTTCTCT ACATAGAAGA TATCGCGGTT
CCAATAAGCA AACTGGGAGA GGCCGTTAAG GCAATTGAGA CTCTGGCGAG GAAATACAGG
ATAAAGTATG CAATGGGCGG ACACATAGGC GACGGCAACT TACACCCGGC GGCATGGGCG
AGGAGGAGCG ATGAAGAGGA GATGTCAAGA GTGAGACAGT TCTATCTTGA GGTGGGGAGG
CTTGCCATTA AGCTGGGAGG TACGATAAGC GCAGAACATG GAATTGGCAC ACATAAGAAG
GCCCTATTGA GGGAGGCGGC AACTGCCAAG GGCAGCGACG TCGTGTTAAA GCTTATGAAA
GAGCTGAAGA GGGTGTTTGA CCCCTATGGC GTATTTAACC CTGGCAAAAT CGTGGACTAA
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| Protein sequence | MKTVLKELES IFGDRLYTEP QILALYSREA SSESGRLPLA VVYPANPDEV VELVKTAIKN
RLKIVPLASS TSLSGNTVTK EEGVVAVSFE KMVKVLEISD VDWYARVQPG IRVDELNLEL
SKYGLQWPVD PASARAASVG GVIANGGGGV KGARYGPASH WVLALEAVIG TGDVIRVGCS
TVKCREGYNL MQLFIGSEGT LGIVTEATLR LAPLPQSFVG VMSRFQDVMP LVDAVIEVRR
SRIWPTVAEF VDREVAKLVG LGEGYYLWLG CEVTPGGEKN MLNALSNVLS SRGEIIAVAS
SLGEFNKLLE PRRRLYSAQL NAAFEDYGTD AFLYIEDIAV PISKLGEAVK AIETLARKYR
IKYAMGGHIG DGNLHPAAWA RRSDEEEMSR VRQFYLEVGR LAIKLGGTIS AEHGIGTHKK
ALLREAATAK GSDVVLKLMK ELKRVFDPYG VFNPGKIVD
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