| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1216 |
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| Symbol | |
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| ID | 4908710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1128433 |
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| End bp | 1129413 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640124970 |
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| Product | sodium/calcium exchanger membrane region |
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| Protein accession | YP_001056107 |
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| Protein GI | 126459829 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.233942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCG AGGGGATTGT GCCCTCCATA GGGCCCTTTG GGGTGGCCGC GGGGGTTTTG
CTCACAGTGT TGGCCGGCCT CCTCATAGAG CAACTCGTCC ACTTTATCTC CTGGCGTTAC
AAAAGGGCCG CCACGGGGGT TGCGGCCATC TTTGCCCCTA TCATAACCTC CAGCCCCGAG
CTGGCGATCT TCACTGTGGC ACTGTTGCAA GGCCAGGCGG AGATCGCTTG GGGCTCCATC
GTGGCTCAGC CCTTTATGGC CTCCACTATC ATATACCCCG TGCTGTTGGC TGTTGCGCTT
GTCTCGTGGG CTTTTAAGCG GAGGAGATAT ATGCTTCTCC ATGTGCATAG GGGGGTAGCC
ATTCCGCTTC TCGTCTTTAC AATTCCCCTG GCCCCTATCC TCATCCTTCA CCCCGAGAAG
TACGGGGCAT ATGGCCAACT CTACGGCCTT GTCCTACTCG CGCTATACGT GCTCTACGCC
AGGTATATGC TTAAGGAAGA GGAGGCAGGA GGAGGGGAGG CCAAGCTGTG GCTACGCCAC
CCCGCCCTAC AGGTAGCTGC CGCTATAGCG GCGATGTATT TTGGCGCCGA GTGGATGGTG
AGTGGAATAA GGGAGATTGG CGCGGCTCTT GGGTTAGACA AGCTGGCGCT TTCTGTCATA
TTAATACCCA TAGCCACCGT GGTTCCTGAG TCAATAGTAG CGCTTATCTT CATAGCTAAG
GGCAAAGACG ACGAGGGGGT CAGCGCGGTG GTAGGGGAGA AGGCGTTGTA CAGCACGTTT
TACCCAGGCC TTGCCATGGC GTTAGGGATC TACACTCTAG AGCCAGCTGC GATAACGGCC
CTTGTGATTG CGATTTTTGT CTCCATTGTG GAAATAGCGA TTGTATGGCG CTTTGGCTAC
TTCGGCCTCT CAGCACCCCT AGGCCTGGCC AGCTACGTAT ACTACGCCTA CTGCTATACC
CTAGGCGGTG CTTGTTTCTG A
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| Protein sequence | MAGEGIVPSI GPFGVAAGVL LTVLAGLLIE QLVHFISWRY KRAATGVAAI FAPIITSSPE
LAIFTVALLQ GQAEIAWGSI VAQPFMASTI IYPVLLAVAL VSWAFKRRRY MLLHVHRGVA
IPLLVFTIPL APILILHPEK YGAYGQLYGL VLLALYVLYA RYMLKEEEAG GGEAKLWLRH
PALQVAAAIA AMYFGAEWMV SGIREIGAAL GLDKLALSVI LIPIATVVPE SIVALIFIAK
GKDDEGVSAV VGEKALYSTF YPGLAMALGI YTLEPAAITA LVIAIFVSIV EIAIVWRFGY
FGLSAPLGLA SYVYYAYCYT LGGACF
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