Gene Pcal_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1198 
Symbol 
ID4909045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1112452 
End bp1112862 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content64% 
IMG OID640124952 
Productiron dependent repressor 
Protein accessionYP_001056089 
Protein GI126459811 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGGCC ACGAGTACCT CAGGTACAGG CCCGAGCACT ACCTAGAGGC CATACACCAG 
CTGGGGCCCC AGGCCACTCT CACCAACGTC TCCAAGGCGC TGGGGGTCAA GCCCAGCACG
GCCAGGAAGA TGTTGCTGGC ACTGGAGAGG CAGGGCCTCG TCAAGTACCA AGGCCGTGGG
GGCATCGCCC TCACCGAGGA GGGGCTTCGG CGCATAAGAG AGCTGGACGA GGTGCACAGG
GCGCTGGCAG AGTTCTTCAA GGCCATAGGA GTGGAGGAGG ACCTCGCCGA GGCCGAGGCG
GAGAAGCTTG AACACGTGAT AGACCGCAGA GTGGTGGAGA AGATGGCCAA GGCCGCGGCT
CTGCTAAAGG CGCTTAGGGA ATTCGCCTGC CCCCCTGCCC AGCGCCCTTA G
 
Protein sequence
MKGHEYLRYR PEHYLEAIHQ LGPQATLTNV SKALGVKPST ARKMLLALER QGLVKYQGRG 
GIALTEEGLR RIRELDEVHR ALAEFFKAIG VEEDLAEAEA EKLEHVIDRR VVEKMAKAAA
LLKALREFAC PPAQRP