Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1198 |
Symbol | |
ID | 4909045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1112452 |
End bp | 1112862 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640124952 |
Product | iron dependent repressor |
Protein accession | YP_001056089 |
Protein GI | 126459811 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGGCC ACGAGTACCT CAGGTACAGG CCCGAGCACT ACCTAGAGGC CATACACCAG CTGGGGCCCC AGGCCACTCT CACCAACGTC TCCAAGGCGC TGGGGGTCAA GCCCAGCACG GCCAGGAAGA TGTTGCTGGC ACTGGAGAGG CAGGGCCTCG TCAAGTACCA AGGCCGTGGG GGCATCGCCC TCACCGAGGA GGGGCTTCGG CGCATAAGAG AGCTGGACGA GGTGCACAGG GCGCTGGCAG AGTTCTTCAA GGCCATAGGA GTGGAGGAGG ACCTCGCCGA GGCCGAGGCG GAGAAGCTTG AACACGTGAT AGACCGCAGA GTGGTGGAGA AGATGGCCAA GGCCGCGGCT CTGCTAAAGG CGCTTAGGGA ATTCGCCTGC CCCCCTGCCC AGCGCCCTTA G
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Protein sequence | MKGHEYLRYR PEHYLEAIHQ LGPQATLTNV SKALGVKPST ARKMLLALER QGLVKYQGRG GIALTEEGLR RIRELDEVHR ALAEFFKAIG VEEDLAEAEA EKLEHVIDRR VVEKMAKAAA LLKALREFAC PPAQRP
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