| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1197 |
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| Symbol | |
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| ID | 4908525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1111325 |
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| End bp | 1112455 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640124951 |
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| Product | natural resistance-associated macrophage protein |
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| Protein accession | YP_001056088 |
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| Protein GI | 126459810 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
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| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTGGA ACGTCTTGGG GCCCGCCACC GTCGTCTCCG TGGCGTATGT AGATCCGGGG
AACTTTGGGG CCAACATAGA GGCTGGGATG AGGTTTGGCC TTTCCCTGCT CTGGGTGGTG
TGGCTCAGCG GCGCGTTGAG CGTGGTGGTG CAGTACGCCG CGGGCATGGT GGGGGTCAGG
AAGGGGGCTG GTATCTTCGA CCTAGTGGGG AGGAGGTGGG TCGCGGCGCC GGTGGGGGTG
GCCGTGGTCT TGGCCACGGA CATGGCCGAG TACATGGGGG TGGTCCTGGG GTTGCACTTC
CTATTCGGCC TGCCCTACGA GGCCGCCGCC GTGGTGGGCT TTGCCGATGT GGCTCTGCTC
GCCGCGCTCG CCGACAGGAG GAGCCTCTTC GTGAAAGTGA TAGGCGCGAT GGTGGCGGCC
ATAGCCGTGA GCTTCCTCGT AGAGCTCTAC TTGGTCAAGC CCGACTGGGC CGCCGTCCTG
CGGTACTCGG TGACTCCAAC GCTCAGCGGC GAGGAGGCGC TGGTGGCCGC CGCCATCGTC
GGCGCGACCA TCATGCCGCA CGCAGTTGTG CTCCACAGCC ACTTGGCGGT GGGCCAGAGG
CGGGAGGAAC ACCTGCGGCA GACCGTGGTC AACCTGCTCG GGGTCGCGGC CATAAACGCC
TCAATCCTAA TCTCCAGCGC GTACATGCTA CACGGCGCCG AGGCCGACGT GGCCGACGTG
CCCAAGTTGC TCGAGCCGCT CTACGGCCCC CTATCCGCCT ACCTCTTCTC CCTAGCCATG
TTGCTCTCCG GGCTCTCCTC CTCCGCCGTG TCTGTGGAGT TCGGCCTAAT CACCGCCCGC
CTCCTCCTGG GGAGGCCCGT GTCGGCTTGG AAGGCCAGGC TGGCGGCCAG GGCCGTAAAC
GTGGCGCCGG CGGTGCTCGC CCTCACGGCA CTCGGCATGA CCCCCCTATC CGTACTTGTA
TACACCCAGT TCGTCCTCGC CGCGGCGCTG CCAGCGGTGT TGGCCATGCT CTGGGCCTGC
TCCAAGGGCG CAGTCGGCGG AGCCGTCAGG GCCGTGGTAG GCGCCACTGC CCTCTACGCC
GCGGCTCTAA CCGCGTTAAC TATTTTAGCT GGCGTACGGG TTGGGCCGTG A
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| Protein sequence | MGWNVLGPAT VVSVAYVDPG NFGANIEAGM RFGLSLLWVV WLSGALSVVV QYAAGMVGVR
KGAGIFDLVG RRWVAAPVGV AVVLATDMAE YMGVVLGLHF LFGLPYEAAA VVGFADVALL
AALADRRSLF VKVIGAMVAA IAVSFLVELY LVKPDWAAVL RYSVTPTLSG EEALVAAAIV
GATIMPHAVV LHSHLAVGQR REEHLRQTVV NLLGVAAINA SILISSAYML HGAEADVADV
PKLLEPLYGP LSAYLFSLAM LLSGLSSSAV SVEFGLITAR LLLGRPVSAW KARLAARAVN
VAPAVLALTA LGMTPLSVLV YTQFVLAAAL PAVLAMLWAC SKGAVGGAVR AVVGATALYA
AALTALTILA GVRVGP
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