Gene Pcal_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1194 
Symbol 
ID4909912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1109310 
End bp1109732 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content62% 
IMG OID640124948 
Producthypothetical protein 
Protein accessionYP_001056085 
Protein GI126459807 
COG category[S] Function unknown 
COG ID[COG4933] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATAA AGCCAAAGTT CGGCTGGGCC ATCCTCCACG GGGAGAAGAG GTACGAGCTT 
AGGAGGCTCG TTGGGAGACT CATAGAGCCC GGCGACGTGG TCTACCTATA CTTAACCAAG
CCGGTCGGCG CAGTCCAAGG CCTCTTTGAG GCCGGAGTTG TCTTCCTAAC GCCGGTGAAA
AACCTCGCCG CCCTCCTCGC AGAGCTGGGA GACACAGGCG TAGGCGAGGA GGACTTGAAA
TACGTCGAGG GGGCCCGATA CGCCATGCTC ATCGAGGTGA AGAACCCGCG GCAGTGCGCC
AAGCCAGTCC CGCCAGCCGA GGCAGGGCTA AGGCCCCCGC CCAGCTACAT GAGGATAGGG
AAGAGGGAAG CAGAGGCCCT TGCAGAGCTG TGCGAGGGCG CTAGGCCCTG GGCTGAAGTT
TAG
 
Protein sequence
MSIKPKFGWA ILHGEKRYEL RRLVGRLIEP GDVVYLYLTK PVGAVQGLFE AGVVFLTPVK 
NLAALLAELG DTGVGEEDLK YVEGARYAML IEVKNPRQCA KPVPPAEAGL RPPPSYMRIG
KREAEALAEL CEGARPWAEV