Gene Pcal_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1186 
Symbol 
ID4909204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1101366 
End bp1102025 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content60% 
IMG OID640124940 
Producthypothetical protein 
Protein accessionYP_001056077 
Protein GI126459799 
COG category[R] General function prediction only 
COG ID[COG0121] Predicted glutamine amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTAGAT TTTACATAGC CAAAGGGCCG GTAGACCTCT CCCGCGCGTT GAGGCTGGCG 
GCTAAGTACG ACCCCTACGC CCCTGGTGAG CGGAAACAAC ATGGCGACGG CTGGGGATAC
GTGGCTGTGT TGGGCAGGGG CTACCTGTAC TATAGGTCTG AGGCGCCCAT ATGGGAAGAC
CCAACCCCCA TACCCATGGG AGAGGTGGTA CTAGCCCACG CCCGCGCTGC ATCGCCCGGC
GAGCCCCTAG GCGTACAACA TGCACACCCC TACATGGCGT ATACGCCCGA CGGGAGGCTC
ATCTTCCTCG CCCACAACGG GTCAGTGGAC AAAAAGGCCA TAGCACAACA ACTAGGCCTA
GACCCAGCCC CCTACACCGA CAGCCACATC TTGGCCCTAT ACTTGGCCAA GCACTGGGAC
AATCCACAGG CCGCCGTGGA GAAGGCCCTG CCCTACGTAA AAACGGCGCT TAACATCGCC
GTGGTAGAGC TCCCAGGCCC CAAGGCCTAC GCCTACACCT ACTACAAGGG GAAGGGGGAG
TACTACCCGC TGTACTTGCT AAGGCTGGGA GTGGGGAAGG CGGTGGCGTC TTCCACTCTA
CTCAGACATG TAGACGCCGA CGCCACAAAG CTAGAGAAGG GCACATTTCT ACAACTCTAA
 
Protein sequence
MCRFYIAKGP VDLSRALRLA AKYDPYAPGE RKQHGDGWGY VAVLGRGYLY YRSEAPIWED 
PTPIPMGEVV LAHARAASPG EPLGVQHAHP YMAYTPDGRL IFLAHNGSVD KKAIAQQLGL
DPAPYTDSHI LALYLAKHWD NPQAAVEKAL PYVKTALNIA VVELPGPKAY AYTYYKGKGE
YYPLYLLRLG VGKAVASSTL LRHVDADATK LEKGTFLQL