Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_1186 |
Symbol | |
ID | 4909204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | + |
Start bp | 1101366 |
End bp | 1102025 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640124940 |
Product | hypothetical protein |
Protein accession | YP_001056077 |
Protein GI | 126459799 |
COG category | [R] General function prediction only |
COG ID | [COG0121] Predicted glutamine amidotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGTAGAT TTTACATAGC CAAAGGGCCG GTAGACCTCT CCCGCGCGTT GAGGCTGGCG GCTAAGTACG ACCCCTACGC CCCTGGTGAG CGGAAACAAC ATGGCGACGG CTGGGGATAC GTGGCTGTGT TGGGCAGGGG CTACCTGTAC TATAGGTCTG AGGCGCCCAT ATGGGAAGAC CCAACCCCCA TACCCATGGG AGAGGTGGTA CTAGCCCACG CCCGCGCTGC ATCGCCCGGC GAGCCCCTAG GCGTACAACA TGCACACCCC TACATGGCGT ATACGCCCGA CGGGAGGCTC ATCTTCCTCG CCCACAACGG GTCAGTGGAC AAAAAGGCCA TAGCACAACA ACTAGGCCTA GACCCAGCCC CCTACACCGA CAGCCACATC TTGGCCCTAT ACTTGGCCAA GCACTGGGAC AATCCACAGG CCGCCGTGGA GAAGGCCCTG CCCTACGTAA AAACGGCGCT TAACATCGCC GTGGTAGAGC TCCCAGGCCC CAAGGCCTAC GCCTACACCT ACTACAAGGG GAAGGGGGAG TACTACCCGC TGTACTTGCT AAGGCTGGGA GTGGGGAAGG CGGTGGCGTC TTCCACTCTA CTCAGACATG TAGACGCCGA CGCCACAAAG CTAGAGAAGG GCACATTTCT ACAACTCTAA
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Protein sequence | MCRFYIAKGP VDLSRALRLA AKYDPYAPGE RKQHGDGWGY VAVLGRGYLY YRSEAPIWED PTPIPMGEVV LAHARAASPG EPLGVQHAHP YMAYTPDGRL IFLAHNGSVD KKAIAQQLGL DPAPYTDSHI LALYLAKHWD NPQAAVEKAL PYVKTALNIA VVELPGPKAY AYTYYKGKGE YYPLYLLRLG VGKAVASSTL LRHVDADATK LEKGTFLQL
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