| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1182 |
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| Symbol | |
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| ID | 4908954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1099507 |
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| End bp | 1100175 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640124936 |
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| Product | 30S ribosomal protein S3Ae |
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| Protein accession | YP_001056073 |
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| Protein GI | 126459795 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1890] Ribosomal protein S3AE |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAGA AGCAGAAGGC TGTTGCCGCG CAGGAGAAGG TCGCCATCTC CAAGAGGGAC
CCCTGGGCGT TGAAGAAGTG GTTCAGCGTG TATGCCCCTC CCTACCTCGG CGGAGTTTTC
CTCGCAGAGG TGCCCGCGGC TGAGGCCCAG AAGCTTGTGA AAAGGACTCT CGAGGTCACG
CTCTACGACA TTACTAAGGA CATTTCCCAC CTCCCCATTA AGCTGAGGTT TCAAATACAT
AGGGTGGATG GGCTAAACGC GTCGACGAGG TTTAAGGGCC TTGAGCTGAC TAGGGACTAC
CTCAGGTCTC TCATTAGGCG GGGCACCAGC AAGATTATGG CTATAACGGA TGTCAAGACT
AAGGACGGGT GGGTCATGAG AGTCGCCGTC CTGGGCGTGA CCACCCACAG GGTAGGCACG
GCGCAGAAGT CGGCAATTCG GAAGCGGTTC ATCGAGGTGG TAACTAAGAA GGCCGCAGAG
GCGGACATTG GGCAGTTTTT AAAGGAGGTG CTTGAGGGGA CTCTGGCCGC CGACTTGTTC
ATAGCTGGGA AGAAGATTGC CCCCATGAGG AAGGTGGAGG TGGCTAAAAT CAAGGTGTTG
AGATATCCGC CGGAGGAGGA GCGCGTCGCG GTGAAGGAGG TAGCGGCGGA GGCCGCCGCC
TCGTCTTAG
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| Protein sequence | MAEKQKAVAA QEKVAISKRD PWALKKWFSV YAPPYLGGVF LAEVPAAEAQ KLVKRTLEVT
LYDITKDISH LPIKLRFQIH RVDGLNASTR FKGLELTRDY LRSLIRRGTS KIMAITDVKT
KDGWVMRVAV LGVTTHRVGT AQKSAIRKRF IEVVTKKAAE ADIGQFLKEV LEGTLAADLF
IAGKKIAPMR KVEVAKIKVL RYPPEEERVA VKEVAAEAAA SS
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