| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1157 |
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| Symbol | |
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| ID | 4908182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1080500 |
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| End bp | 1081204 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640124911 |
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| Product | undecaprenyl pyrophosphate synthetase |
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| Protein accession | YP_001056048 |
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| Protein GI | 126459770 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATGTTA AAATCCCCAC GCACATCGCA GTAATACCCG ACGGCAATAG GAGATACGCC
AAGAAGGTCG GACTAGACTT CTACCACGCC TACAAGAGGG GCGTGGAGAA GGTGAGGTCG
TTCCTGCTTT GGGCCCTTGA GTATCGGGAG ATTAAGAACG TCACCTTCTT CGCCCTATCC
ACTGAGAACC TCCAGAGAAG CCGCCTAGAG CTCGAGATCC TCTTTAGAAT ATTCGAGGAG
GAGCTTCGGA AGACTCTGGA GGACCCCCTC ATCCATGAGA ACAGAGTAAG AGTCAGATTC
ATTGGAGACA TGTCGCTTTT GCCCAGTAGA GTTGTAAAGT GGGCCGAGGA GCTGGAGGCT
GCCACAAAGA ACTACGGCAA CTACCACTTG ACCCTCGCCC TGGGCTACGG GGGCCGCGCC
GAGATTGTGA GATGTGTGAA AAGGCTTTTA TCTGGCGAAG TGAAGCTGGC CGAGGTAACT
GAGGAGTCTC TCTTCCAGTG TTTAGACACG AGGGATTTGC CCAACCCAGA GCCCGACGTG
GTGGTGAGGA CAGGCGGGGA GAAGAGGCTC AGCAACTTCC TCCTCTACCA GACGGCGTAC
TCGGAGCTGG TGTTTTTAGA CAAGCTCTGG CCCGAGGTAG AGAGGGAGGA CTTGGCCTAC
ATTGTGGAGG AGTACTCGAG GAGGCAGAGG CGGTTCGGCA GGTGA
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| Protein sequence | MYVKIPTHIA VIPDGNRRYA KKVGLDFYHA YKRGVEKVRS FLLWALEYRE IKNVTFFALS
TENLQRSRLE LEILFRIFEE ELRKTLEDPL IHENRVRVRF IGDMSLLPSR VVKWAEELEA
ATKNYGNYHL TLALGYGGRA EIVRCVKRLL SGEVKLAEVT EESLFQCLDT RDLPNPEPDV
VVRTGGEKRL SNFLLYQTAY SELVFLDKLW PEVEREDLAY IVEEYSRRQR RFGR
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