| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1153 |
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| Symbol | |
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| ID | 4908805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1076575 |
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| End bp | 1077333 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640124907 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001056044 |
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| Protein GI | 126459766 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.94325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTAAGA TGATAACTCT AGACGTTTGG GGCACAATTC TGCCAGTGGA GCCTGCCTTA
AAAACTGTTG TGGACGTAAT TTACAAAAGC CTAGGGGGCA GGGCGCCTTT TCAGACGCTT
CAGGCGCTGG TAAACGAGGA GAGGAGGAAG ATTAAGCTGG CTAGGAGAGA AAAGCACGAG
GTAGTGCCGC CGGTCTACGT ACTGCTCGAC ATGCAGAGGC AGCTCCGCAG TAGGGGCATA
AACGCCGCCT TCGACGTATA CCAAGTGCAA GAGGCCATAG ACCAGGCGGT TGGGAGCTTG
GAAATTGCCC CAGAGGGCGA CGCCGTTGAG GCGATTAAGT TGGCAAAAGA CGAGGGGTAT
AAGATAGGCA TTATTTCAAA TGTCCTCTTC TGGCGGTCTA GGGCGACTAA GAGGTTGTTG
GAGAGCTTGG GCATAGCCCA GCTGGTGGAC TTGCAACTGT ACGCAGACGA CGTTGGCTAC
GTCAAGCCCT CTGTGCAGAT ATTTGAGGCG GCTCGGCAGA TATTGCTGGG AGACGTGGTC
CCCGACGTAT ATCTCCACAT AGGCGACGAC ATGTACGAAG ACTTCCTAGG CGCCTTGATG
GCAAGCTACG GCGCCGTGCT CGTGGATAGA CATGGTGTCT ACGTGAAAAA GGAGTTTGTG
GAGTCTATAC CCTGCAGGGC GTACATTGTG CGTAGCTTAA AGACTCTCCC ACTTGTGTTA
CACGCGGCGG AGAGCTGCGT TAAAGAAGCT TCGTTGTGA
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| Protein sequence | MIKMITLDVW GTILPVEPAL KTVVDVIYKS LGGRAPFQTL QALVNEERRK IKLARREKHE
VVPPVYVLLD MQRQLRSRGI NAAFDVYQVQ EAIDQAVGSL EIAPEGDAVE AIKLAKDEGY
KIGIISNVLF WRSRATKRLL ESLGIAQLVD LQLYADDVGY VKPSVQIFEA ARQILLGDVV
PDVYLHIGDD MYEDFLGALM ASYGAVLVDR HGVYVKKEFV ESIPCRAYIV RSLKTLPLVL
HAAESCVKEA SL
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