Gene Pcal_1144 details

Gene Information

• Locus tag: Pcal_1144
• ID: 4908787
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 1070759
• End bp: 1071280
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640124898
• Product: hypothetical protein
• Protein accession: YP_001056035
• Protein GI: 126459757
• COG category: [S] Function unknown
• COG ID: [COG1547] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.44042
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGGTATT TGCTCATAGT GGAGAACCCC GGCTACACAG TCAAAAATAG GCCGCATTTG 
TTAAAGGAAC TCAGGGCGCA CCTCCCAGTC ATAGCCCTCA GAATCGCCAC TCGGCACATA 
GAAGTAGATG TGAAAGGCGC CGACCCCCAA GAGGCCAGGA AAATTGTCGA GAGGATTTTG 
GGAGGATCTG TGGTAGAGGT AGTGGACATA ACCTTTGAAG AGGTCAAGGG CGGCGTAGAG 
GACTACGTCC GGCTCTTTAA CCAAGAGAGG TTTTGGGAGG CCCACAACGC CCTCGAGGGG 
CTTTGGAGAT CCACCAGAAA CCCCACGTTG CAGGGGCTGA TCATGCTCGC CGCTGCGTTC 
GTAAAACTGC AAGAGGGGCA GTTGGACAAG TTTGAAACAC TGATAAAAGA GGCGGTGGGC 
CTAATAACAG AGGACGTGGG GTGTATAAGG GCCAAGGAGC TGAGGGAGAA GGCCTTGGCC 
GCGTTGGTAC AGAAGGCGCC TTTTAGAATA GAATGCTCTT GA 

 

Protein sequence

MRYLLIVENP GYTVKNRPHL LKELRAHLPV IALRIATRHI EVDVKGADPQ EARKIVERIL 
GGSVVEVVDI TFEEVKGGVE DYVRLFNQER FWEAHNALEG LWRSTRNPTL QGLIMLAAAF 
VKLQEGQLDK FETLIKEAVG LITEDVGCIR AKELREKALA ALVQKAPFRI ECS