| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1133 |
|---|
| Symbol | |
|---|
| ID | 4908549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 1063581 |
|---|
| End bp | 1064876 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640124887 |
|---|
| Product | asparaginyl-tRNA synthetase |
|---|
| Protein accession | YP_001056024 |
|---|
| Protein GI | 126459746 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.563116 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCCCT ACAAGTCGGC AATCCCCATA GCCGAGGCGT TGCGGAGGGG CGAGGGCAAG
GCCACAGTTA GGGGGTGGGT TTATAGGAAG AGGACGCTTA AGGAAAAGGT CTTCCTTCTC
CTGAGAGACG CCACGGGGGT TATCCAGCTC GTCGTCCCCA GGGCCAAGTT CCCGGAGGCC
GAGTCGTTGA ACTTGGAGTC GTCTCTGGTG GCCACTGGGG TGCTTGTCAG AGAGCCCAGG
GCGCCTGGCG GCGTTGAGCT ACATGTGGAA AGCATAGACT GGGTCTACGT GGGCGAGCCC
TATCCAATAA ATGAAGACGC CGCGGTCTCA GACAGCGAGT ACCTCCTCGA CGTTAGACAC
CTCTGGTTGA GGAGTAGGAA GATGCAGGCC ATACTGAAGA TTAGGCACAC CGTCTTTGGG
GCAATACATG ACTACTTTAG GCGGAGGGGC TTCTACGAGG TGCACCCGCC GATGTTTATA
ACGGCGGCTG TGGAAGGCGG GGCCACTCTA TTCAAGGTGG AGTACTTCGA CCGCACGGTA
TATCTCACGC AGAGCTCGCA GTTCTACCTA GAGGCGTTGA TCTACAGCCT AGAGAAGGTC
TACACAGTGG CTCCAAGCTT TAGGGCGGAG CCATCTAGGA CTAGGCGCCA CCTCACCGAG
TTTTGGCACG CCGAGATGGA GATCGCGTGG GCGCACATGG ACGACGCGGC TAAAGTCGGC
GAGGAGGTGA TAGGCCACGT GGTTGAGAGG GTGCTGGACG AGAGGCAGGA TGAGTTAAAG
CTCTTGGGCA GGAAGGTTGA GGCTCTAGAG AGGGCAAAGC CGCCATTCCA CTGGCTCAGC
TACGACGAGG CTATAGAGGT GCTGAGGAAG AAGGGCTTTG CGCTGAGCTG GGGCGACGAC
ATAGGCGCAG ATGAGGAGAG GGCCCTCACT CTTGAGTTTG ACAAGCCCAT AATCCTCCAC
GGGTTCCCCG AGAAGCTCAA GGCCTTCTAC CACAGGAACA ACCCCCAGAG GCCGGAGGTT
ACGCTGAGCT TTGACGTGCT TCTCCCAGAG GGATACGGCG AAGTTATAGG CGGGGGAGAG
AGGATATACG ACGCCAAGGA GCTCGTGGAG AAGATAATCC GCTTTGGGCT AAACCCAGAG
GACTACCAGT GGTACATCGA CTTGAGGAGG TACGGCTCAG TGCCCCACGC CGGGTTTGGC
CTCGGCGTAG ACAGACTCGT CATGTGGATA GCCGGCGCAG ACCACATAAG AGACGTGGTC
CCATTCCCCC GTGACATTAG GAGGACAAGG CCCTAG
|
|---|
| Protein sequence | MLPYKSAIPI AEALRRGEGK ATVRGWVYRK RTLKEKVFLL LRDATGVIQL VVPRAKFPEA
ESLNLESSLV ATGVLVREPR APGGVELHVE SIDWVYVGEP YPINEDAAVS DSEYLLDVRH
LWLRSRKMQA ILKIRHTVFG AIHDYFRRRG FYEVHPPMFI TAAVEGGATL FKVEYFDRTV
YLTQSSQFYL EALIYSLEKV YTVAPSFRAE PSRTRRHLTE FWHAEMEIAW AHMDDAAKVG
EEVIGHVVER VLDERQDELK LLGRKVEALE RAKPPFHWLS YDEAIEVLRK KGFALSWGDD
IGADEERALT LEFDKPIILH GFPEKLKAFY HRNNPQRPEV TLSFDVLLPE GYGEVIGGGE
RIYDAKELVE KIIRFGLNPE DYQWYIDLRR YGSVPHAGFG LGVDRLVMWI AGADHIRDVV
PFPRDIRRTR P
|
|---|
| |