Gene Pcal_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1120 
Symbol 
ID4909740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1053779 
End bp1054201 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content54% 
IMG OID640124874 
Producthypothetical protein 
Protein accessionYP_001056011 
Protein GI126459733 
COG category[R] General function prediction only 
COG ID[COG0727] Predicted Fe-S-cluster oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACACG TGTGGGGCGA TTTGAGGTGG TTTGAGGTGA AGTTCAAGTG TATAAAGTGT 
GGCATATGTT GCATAGGCAC AGAGATGGAG CTCACGGCTG AGGACATAAG GCGAATCGAG
GCCGCGGGGT ACAAGATGGA GGATTTCGTG GTGGAGAAAG ACGGCGTGTA TAGGCTGAAG
AACGTTGATG GGCACTGCGT CTTTTACGAC CCTGCGACTA GGATGTGCAA GATATACGAC
ATAAGGCCCA TAGGGTGCCG CCTGTACCCC CTCGTGTTCA ACGGCAGCAG CGTAGAGGTG
GACAAGACTT GTCCCACTTG GCACACGGTG CCGAAGAGCG AAGTAGCCCG CCTAGGCCCC
TACGTGGTTG AGTTTTTGAA GGAGGTCGAG CGCGCTAAGG TGAAAATTAA GCTAAGGCTT
TGA
 
Protein sequence
MRHVWGDLRW FEVKFKCIKC GICCIGTEME LTAEDIRRIE AAGYKMEDFV VEKDGVYRLK 
NVDGHCVFYD PATRMCKIYD IRPIGCRLYP LVFNGSSVEV DKTCPTWHTV PKSEVARLGP
YVVEFLKEVE RAKVKIKLRL